About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides01596FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides01597-
Paelopatides01598PROTEIN CBG26694
Paelopatides01599-
Paelopatides01600REVERSE TRANSCRIPTASES
Paelopatides01601REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides01602REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides01603-
Paelopatides01604-
Paelopatides01605CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides01606CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides01608CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides01609CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides01610CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides0161160 KDA RIBONUCLEOPROTEIN SSA/RO
Paelopatides01612CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides01613-
Paelopatides01614-
Paelopatides01615-
Paelopatides01616-
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