About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides01637FI04487P
Paelopatides01638REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides01639ACYL-COA THIOESTERASE
Paelopatides01640-
Paelopatides01641ENDONUCLEASE-RELATED
Paelopatides01642RIBOSOMAL PROTEIN S6 KINASE
Paelopatides01643-
Paelopatides01644-
Paelopatides01645ADP RIBOSYLATION FACTOR-RELATED
Paelopatides01646FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides01647ACROSIN-RELATED
Paelopatides01648RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides01649PROTEIN CBG26694
Paelopatides01650ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides01651POTASSIUM CHANNEL, SUBFAMILY K
Paelopatides01652POL PROTEIN
Paelopatides01653POPEYE DOMAIN CONTAINING PROTEIN
Paelopatides01654PROTEIN CBG26694
Paelopatides01655PROTEIN CBG26694
Paelopatides01657-
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