About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides01700RETROTRANSPOSON
Paelopatides01701RETROTRANSPOSON
Paelopatides01702PROTEIN SGT1 HOMOLOG
Paelopatides01703PROTEIN CBG26694
Paelopatides01704PROTEIN CBG26694
Paelopatides01705PROTEIN SGT1 HOMOLOG
Paelopatides01706MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM9B
Paelopatides01707UNCHARACTERIZED
Paelopatides01708-
Paelopatides01709SHORT COILED COIL PROTEIN
Paelopatides01710GAG-RELATED PROTEIN
Paelopatides01711-
Paelopatides01712-
Paelopatides01713FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED
Paelopatides01714ZINC FINGER PROTEIN 200
Paelopatides01715ZINC FINGER PROTEIN
Paelopatides01716MIP31509P
Paelopatides01717-
Paelopatides01718ODD-SKIPPED - RELATED
Paelopatides01719PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
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