About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides01720-
Paelopatides01721-
Paelopatides01722DEP DOMAIN-CONTAINING
Paelopatides01723UNCHARACTERIZED
Paelopatides0172450S/60S RIBOSOMAL PROTEIN L16
Paelopatides01725ADENOSINE KINASE
Paelopatides01726ADENOSINE KINASE
Paelopatides01727AGAP008810-PA
Paelopatides01728REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides01729DUF614 FAMILY PROTEIN-RELATED
Paelopatides01730DUF614 FAMILY PROTEIN-RELATED
Paelopatides01731DUF614 FAMILY PROTEIN-RELATED
Paelopatides01732-
Paelopatides01733-
Paelopatides01734IMIDAZOLONEPROPIONASE
Paelopatides01735IMIDAZOLONEPROPIONASE
Paelopatides01736L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides01737REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides01738REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides01739BUCENTAUR RELATED
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