About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides01658-
Paelopatides01659TRANSLATIONAL ACTIVATOR GCN1-RELATED
Paelopatides01660TRANSLATIONAL ACTIVATOR GCN1-RELATED
Paelopatides01661PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
Paelopatides01662NADH DEHYDROGENASE
Paelopatides01663-
Paelopatides01664-
Paelopatides01665LD18447P
Paelopatides01666-
Paelopatides01667N-HYDROXYARYLAMINE O-ACETYLTRANSFERASE
Paelopatides01668FI04643P-RELATED
Paelopatides01669-
Paelopatides01670-
Paelopatides01673FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides01674TRANSPOSON
Paelopatides01675RETROTRANSPOSON
Paelopatides01676SUPRABASAL-SPECIFIC PROTEIN SUPRABASIN
Paelopatides01677-
Paelopatides01678PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
Paelopatides01679ZINC FINGER PROTEIN
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