About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides01761ZINC FINGER PROTEIN 183
Paelopatides01762MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides01763-
Paelopatides01764TRANSPOSABLE ELEMENT-RELATED
Paelopatides01765MICROTUBULE-ASSOCIATED PROTEIN
Paelopatides01766-
Paelopatides01767COILED-COIL DOMAIN-CONTAINING PROTEIN 175
Paelopatides01768COILED-COIL DOMAIN-CONTAINING PROTEIN 175
Paelopatides01769REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides01770-
Paelopatides01771REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides01772BUCENTAUR RELATED
Paelopatides01773REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides01774BUCENTAUR RELATED
Paelopatides01775ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides01776INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN FAMILY MEMBER
Paelopatides01777-
Paelopatides01778-
Paelopatides01779CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides01780-
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