About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides01495ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
Paelopatides01496ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
Paelopatides01497ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
Paelopatides01498-
Paelopatides01499-
Paelopatides01500-
Paelopatides01501ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides01502-
Paelopatides01503-
Paelopatides01504TMEM26 PROTEIN
Paelopatides01505-
Paelopatides01506TMEM26 PROTEIN
Paelopatides01507CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44)
Paelopatides01508-
Paelopatides01509L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides01510-
Paelopatides01511DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE DSOR1-LIKE PROTEIN
Paelopatides01512ADENYLATE CYCLASE TYPE 1
Paelopatides01513PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides01514PHD-TYPE DOMAIN-CONTAINING PROTEIN
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