About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides01414ADP RIBOSYLATION FACTOR-RELATED
Paelopatides01415ADP RIBOSYLATION FACTOR-RELATED
Paelopatides01416MULTIPLE MYELOMA TUMOR-ASSOCIATED PROTEIN 2 FAMILY MEMBER
Paelopatides01417GTPASE, IMAP FAMILY MEMBER-RELATED
Paelopatides01418POL PROTEIN
Paelopatides01419SORTING NEXIN
Paelopatides01420PHOSPHOMANNOMUTASE
Paelopatides01421BEN DOMAIN-CONTAINING PROTEIN 6
Paelopatides01422TORSIN
Paelopatides01423IRON-SULFUR CLUSTER ASSEMBLY PROTEIN
Paelopatides01424PARANEOPLASTIC ANTIGEN
Paelopatides01425-
Paelopatides01426PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides01427PROTEIN CBG26694
Paelopatides01428OLIGORIBONUCLEASE, MITOCHONDRIAL
Paelopatides01429-
Paelopatides01430-
Paelopatides01431-
Paelopatides01432EXPRESSED PROTEIN
Paelopatides01433-
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