About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides01434SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides01435-
Paelopatides01436PROTEIN KINASE C, MU
Paelopatides01437RIBOSOMAL PROTEIN S6 KINASE
Paelopatides01438ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides01439ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides01440-
Paelopatides01441-
Paelopatides01442REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides01443-
Paelopatides01444BUCENTAUR RELATED
Paelopatides01445LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
Paelopatides01446PEPTIDOGLYCAN RECOGNITION PROTEIN
Paelopatides01447-
Paelopatides01448FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides01449NADPH OXIDASE
Paelopatides01450-
Paelopatides01451FORMIN
Paelopatides01452EGF-LIKE DOMAIN-CONTAINING PROTEIN
Paelopatides01453-
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