About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides01393-
Paelopatides01394FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides01395ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides01396FOLATE RECEPTOR
Paelopatides01397-
Paelopatides01398DNA HELICASE RECQ FAMILY MEMBER
Paelopatides01399-
Paelopatides01400FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides01401AMINO ACID TRANSPORTER
Paelopatides01402CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides01403CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides01404SODIUM/CALCIUM EXCHANGER
Paelopatides01405PHOSPHOHEXOMUTASE FAMILY MEMBER
Paelopatides01406PHOSPHOHEXOMUTASE FAMILY MEMBER
Paelopatides01408PHOSPHOHEXOMUTASE FAMILY MEMBER
Paelopatides01409GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides01410GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides01411-
Paelopatides01412SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED
Paelopatides01413EF HAND DOMAIN FAMILY A1,A2-RELATED
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