About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides01266GLUTATHIONE S-TRANSFERASE
Paelopatides01267POL PROTEIN
Paelopatides01268-
Paelopatides01270-
Paelopatides01271-
Paelopatides01274TYROSINE-PROTEIN KINASE RECEPTOR
Paelopatides01275TYROSINE-PROTEIN KINASE
Paelopatides01276TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides01277TYROSINE-PROTEIN KINASE
Paelopatides01278RETROTRANSPOSON
Paelopatides012791-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATED
Paelopatides01280CELL CYCLE CONTROL PROTEIN CWF15
Paelopatides01281-
Paelopatides01282POL PROTEIN
Paelopatides01283ZGC:195170
Paelopatides01284FTP DOMAIN-CONTAINING PROTEIN
Paelopatides01285REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides01286LEUCINE-RICH REPEAT-CONTAINING
Paelopatides01287CARBONIC ANHYDRASE
Paelopatides01288-
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