About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides01159APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
Paelopatides01160HOMOLOC-13
Paelopatides01161-
Paelopatides01162-
Paelopatides01163-
Paelopatides01164ARYLSULFATASE FAMILY MEMBER
Paelopatides01165UNCHARACTERIZED
Paelopatides01166OVOCHYMASE-RELATED
Paelopatides01167-
Paelopatides01168RAS-RELATED PROTEIN RAB
Paelopatides01169SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides01170-
Paelopatides01171UNCHARACTERIZED
Paelopatides01172-
Paelopatides01173SMALL NUCLEAR RIBONUCLEOPROTEIN-ASSOCIATED PROTEIN B AND N
Paelopatides01174UNCHARACTERIZED
Paelopatides01175-
Paelopatides01176-
Paelopatides01177-
Paelopatides01178FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
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