About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides01204TALIN
Paelopatides01205-
Paelopatides01206EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 7
Paelopatides01207ESOPHAGEAL CANCER ASSOCIATED PROTEIN
Paelopatides01208OUT AT FIRST
Paelopatides0120960S ACIDIC RIBOSOMAL PROTEIN P1
Paelopatides01210KNIRPS-RELATED PROTEIN-RELATED
Paelopatides01211KNIRPS-RELATED PROTEIN-RELATED
Paelopatides01212REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides01213ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides01214ZGC:195170
Paelopatides01215-
Paelopatides01216SI:CH211-108C17.2-RELATED-RELATED
Paelopatides01217-
Paelopatides01218-
Paelopatides01219SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides01220SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides01222ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides01223TRANSPOSON
Paelopatides01224REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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