About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides01225ENDONUCLEASE-RELATED
Paelopatides01226SI:CH211-196P9.1-RELATED
Paelopatides01227-
Paelopatides01228DNA HELICASE RECQ FAMILY MEMBER
Paelopatides01229-
Paelopatides01230-
Paelopatides01231-
Paelopatides01232CARBOXYLESTERASE
Paelopatides01233EPM2A-INTERACTING PROTEIN 1
Paelopatides01234TRANSMEMBRANE PROTEIN
Paelopatides01235THREONINE-TRNA LIGASE
Paelopatides01236NASOPHARYNGEAL EPITHELIUM SPECIFIC PROTEIN 1
Paelopatides01237NASOPHARYNGEAL EPITHELIUM SPECIFIC PROTEIN 1
Paelopatides01238LRRGT00142-RELATED
Paelopatides01239-
Paelopatides01240TRANSMEMBRANE PROTEIN 101
Paelopatides01241RESISTANCE TO INHIBITORS OF CHOLINESTERASE PROTEIN 3 RIC3
Paelopatides01242CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides01243-
Paelopatides01244-
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