Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8035021.1 | IMPORT ATP-BINDING PROTEIN |
| CAI8035022.1 | IMPORT ATP-BINDING PROTEIN |
| CAI8035023.1 | ATP-DEPENDENT CLP PROTEASE |
| CAI8035024.1 | ATP-DEPENDENT CLP PROTEASE |
| CAI8035025.1 | UDP-3-O-ACYLGLUCOSAMINE N-ACYLTRANSFERASE |
| CAI8035026.1 | UDP-3-O-ACYLGLUCOSAMINE N-ACYLTRANSFERASE |
| CAI8035027.1 | |
| CAI8035028.1 | 3-HYDROXYACYL-[ACYL-CARRIER-PROTEIN] DEHYDRATASE |
| CAI8035029.1 | ACYL-[ACYL-CARRIER-PROTEIN]--UDP-N-ACETYLGLUCOSAMINE O-ACYLTRANSFERASE |
| CAI8035030.1 | LIPID-A-DISACCHARIDE SYNTHASE |
| CAI8035031.1 | TETRAACYLDISACCHARIDE 4'-KINASE |
| CAI8035032.1 | DIPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN DPPB-RELATED |
| CAI8035033.1 | OLIGOPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN APPC |
| CAI8035034.1 | |
| CAI8035035.1 | GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED |
| CAI8035036.1 | NUCLEOSIDE-DIPHOSPHATE-SUGAR EPIMERASE |
| CAI8035037.1 | TRANSMEMBRANE PROTEIN 256 |
| CAI8035038.1 | |
| CAI8035039.1 | TRNA SULFURTRANSFERASE |
| CAI8035041.1 | |
| CAI8035040.1 | |
| CAI8035042.1 | ADHESION G-PROTEIN COUPLED RECEPTOR V1 |
| CAI8035043.1 | |
| CAI8035044.1 | |
| CAI8035045.1 | |
| CAI8035046.1 | |
| CAI8035047.1 | |
| CAI8035048.1 | |
| CAI8035049.1 | |
| CAI8035052.1 | CHOLINE/ETHANOALAMINE KINASE |
| CAI8035050.1 | CHOLINE/ETHANOALAMINE KINASE |
| CAI8035051.1 | CHOLINE/ETHANOALAMINE KINASE |
| CAI8035055.1 | CHOLINE/ETHANOALAMINE KINASE |
| CAI8035054.1 | CHOLINE/ETHANOALAMINE KINASE |
| CAI8035053.1 | CHOLINE/ETHANOALAMINE KINASE |
| CAI8035056.1 | CHOLINE/ETHANOALAMINE KINASE |
| CAI8035057.1 | CHOLINE/ETHANOALAMINE KINASE |
| CAI8035058.1 | CHOLINE/ETHANOALAMINE KINASE |
| CAI8035059.1 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| CAI8035060.1 | |
| CAI8035061.1 | QUEUINE TRNA-RIBOSYLTRANSFERASE |
| CAI8035062.1 | QUEUINE TRNA-RIBOSYLTRANSFERASE |
| CAI8035063.1 | QUEUINE TRNA-RIBOSYLTRANSFERASE |
| CAI8035064.1 | QUEUINE TRNA-RIBOSYLTRANSFERASE |
| CAI8035065.1 | SULFUR CARRIER PROTEIN SLR0821-RELATED |
| CAI8035066.1 | THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED |
| CAI8035067.1 | |
| CAI8035068.1 | SODIUM ION/PROTON ANTIPORTER NHAA-RELATED |
| CAI8035069.1 | SODIUM ION/PROTON ANTIPORTER NHAA-RELATED |
| CAI8035070.1 | SODIUM ION/PROTON ANTIPORTER NHAA-RELATED |
