Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8034821.1 | UNCHARACTERIZED |
| CAI8034824.1 | RIBOSOMAL PROTEIN S6 KINASE |
| CAI8034822.1 | RIBOSOMAL PROTEIN S6 KINASE |
| CAI8034823.1 | RIBOSOMAL PROTEIN S6 KINASE |
| CAI8034826.1 | RIBOSOMAL PROTEIN S6 KINASE |
| CAI8034825.1 | RIBOSOMAL PROTEIN S6 KINASE |
| CAI8034827.1 | RIBOSOMAL PROTEIN S6 KINASE |
| CAI8034830.1 | |
| CAI8034829.1 | |
| CAI8034828.1 | |
| CAI8034831.1 | |
| CAI8034832.1 | |
| CAI8034833.1 | COILED-COIL DOMAIN-CONTAINING PROTEIN 87 |
| CAI8034834.1 | |
| CAI8034835.1 | |
| CAI8034836.1 | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED |
| CAI8034837.1 | |
| CAI8034838.1 | |
| CAI8034839.1 | |
| CAI8034840.1 | |
| CAI8034841.1 | |
| CAI8034842.1 | AGAP007712-PA |
| CAI8034843.1 | AGAP007712-PA |
| CAI8034844.1 | MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE |
| CAI8034845.1 | MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE |
| CAI8034846.1 | MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE |
| CAI8034847.1 | ACTIN |
| CAI8034848.1 | ACTIN |
| CAI8034849.1 | |
| CAI8034853.1 | ALTERNATIVE OXIDASE |
| CAI8034852.1 | ALTERNATIVE OXIDASE |
| CAI8034851.1 | ALTERNATIVE OXIDASE |
| CAI8034850.1 | ALTERNATIVE OXIDASE |
| CAI8034855.1 | ALTERNATIVE OXIDASE |
| CAI8034854.1 | ALTERNATIVE OXIDASE |
| CAI8034856.1 | |
| CAI8034857.1 | |
| CAI8034858.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8034859.1 | UNCHARACTERIZED |
| CAI8034861.1 | UNCHARACTERIZED |
| CAI8034860.1 | UNCHARACTERIZED |
| CAI8034862.1 | UNCHARACTERIZED |
| CAI8034863.1 | UNCHARACTERIZED |
| CAI8034864.1 | UNCHARACTERIZED |
| CAI8034865.1 | UNCHARACTERIZED |
| CAI8034868.1 | MUCIN 4-RELATED |
| CAI8034867.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8034866.1 | MUCIN 4-RELATED |
| CAI8034869.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8034871.1 | SRCR DOMAIN-CONTAINING PROTEIN |
