Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8034621.1 | |
| CAI8034623.1 | CYTOKINE RECEPTOR |
| CAI8034622.1 | |
| CAI8034624.1 | CYTOKINE RECEPTOR |
| CAI8034625.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8034626.1 | |
| CAI8034627.1 | NF-KAPPA-B INHIBITOR ALPHA |
| CAI8034628.1 | TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN |
| CAI8034629.1 | SLL0310 PROTEIN |
| CAI8034630.1 | B30.2/SPRY DOMAIN-CONTAINING PROTEIN |
| CAI8034631.1 | B30.2/SPRY DOMAIN-CONTAINING PROTEIN |
| CAI8034632.1 | QUINONE OXIDOREDUCTASE PIG3-RELATED |
| CAI8034635.1 | EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED |
| CAI8034636.1 | EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED |
| CAI8034637.1 | EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED |
| CAI8034634.1 | EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED |
| CAI8034633.1 | EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED |
| CAI8034638.1 | EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED |
| CAI8034639.1 | EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED |
| CAI8034640.1 | EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED |
| CAI8034641.1 | EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED |
| CAI8034642.1 | |
| CAI8034643.1 | |
| CAI8034644.1 | |
| CAI8034645.1 | |
| CAI8034649.1 | |
| CAI8034646.1 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
| CAI8034648.1 | |
| CAI8034647.1 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
| CAI8034650.1 | MANNOSE-6-PHOSPHATE RECEPTOR FAMILY MEMBER |
| CAI8034651.1 | MANNOSE-6-PHOSPHATE RECEPTOR FAMILY MEMBER |
| CAI8034652.1 | |
| CAI8034653.1 | |
| CAI8034654.1 | TRNA WYBUTOSINE-SYNTHESIZING PROTEIN 4 |
| CAI8034655.1 | ZINC FINGER PROTEIN 142 |
| CAI8034657.1 | CONDENSIN |
| CAI8034656.1 | |
| CAI8034658.1 | |
| CAI8034659.1 | |
| CAI8034660.1 | |
| CAI8034661.1 | |
| CAI8034662.1 | |
| CAI8034663.1 | |
| CAI8034664.1 | |
| CAI8034665.1 | |
| CAI8034666.1 | TETRATRICOPEPTIDE REPEAT PROTEIN 38 |
| CAI8034667.1 | TETRATRICOPEPTIDE REPEAT PROTEIN 38 |
| CAI8034669.1 | NUCLEAR HORMONE RECEPTOR |
| CAI8034668.1 | |
| CAI8034671.1 |
