Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8034423.1 | SERINE/THREONINE-PROTEIN KINASE FRAY2 |
| CAI8034428.1 | SERINE/THREONINE-PROTEIN KINASE FRAY2 |
| CAI8034426.1 | SERINE/THREONINE-PROTEIN KINASE FRAY2 |
| CAI8034427.1 | SERINE/THREONINE-PROTEIN KINASE FRAY2 |
| CAI8034425.1 | SERINE/THREONINE-PROTEIN KINASE FRAY2 |
| CAI8034424.1 | SERINE/THREONINE-PROTEIN KINASE FRAY2 |
| CAI8034422.1 | SERINE/THREONINE-PROTEIN KINASE FRAY2 |
| CAI8034421.1 | SERINE/THREONINE-PROTEIN KINASE FRAY2 |
| CAI8034429.1 | SERINE/THREONINE-PROTEIN KINASE FRAY2 |
| CAI8034430.1 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| CAI8034433.1 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| CAI8034434.1 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| CAI8034432.1 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| CAI8034431.1 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| CAI8034435.1 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| CAI8034436.1 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| CAI8034437.1 | |
| CAI8034438.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8034439.1 | BLOM7 |
| CAI8034440.1 | |
| CAI8034442.1 | |
| CAI8034443.1 | |
| CAI8034444.1 | |
| CAI8034441.1 | |
| CAI8034445.1 | |
| CAI8034448.1 | ANGIOGENIC FACTOR WITH G PATCH AND FHA DOMAINS 1 |
| CAI8034447.1 | ANGIOGENIC FACTOR WITH G PATCH AND FHA DOMAINS 1 |
| CAI8034449.1 | ANGIOGENIC FACTOR WITH G PATCH AND FHA DOMAINS 1 |
| CAI8034446.1 | ANGIOGENIC FACTOR WITH G PATCH AND FHA DOMAINS 1 |
| CAI8034450.1 | |
| CAI8034455.1 | NICALIN |
| CAI8034454.1 | NICALIN |
| CAI8034457.1 | NICALIN |
| CAI8034456.1 | NICALIN |
| CAI8034453.1 | NICALIN |
| CAI8034452.1 | NICALIN |
| CAI8034451.1 | NICALIN |
| CAI8034458.1 | NICALIN |
| CAI8034459.1 | |
| CAI8034460.1 | HEAT SHOCK PROTEIN 70KDA |
| CAI8034461.1 | |
| CAI8034462.1 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| CAI8034463.1 | |
| CAI8034464.1 | |
| CAI8034465.1 | |
| CAI8034466.1 | |
| CAI8034467.1 | EPH RECEPTOR A5 |
| CAI8034468.1 | |
| CAI8034469.1 | POLY(A) RNA POLYMERASE |
| CAI8034471.1 | PKSB |
