Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8034271.1 | SURFACE ANTIGEN BSPA-LIKE-RELATED |
| CAI8034272.1 | SURFACE ANTIGEN BSPA-LIKE-RELATED |
| CAI8034273.1 | NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12 |
| CAI8034274.1 | |
| CAI8034275.1 | OS02G0815200 PROTEIN |
| CAI8034278.1 | EPH RECEPTOR A5 |
| CAI8034277.1 | EPH RECEPTOR A5 |
| CAI8034276.1 | CYTOKINE RECEPTOR |
| CAI8034280.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8034279.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8034281.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8034282.1 | |
| CAI8034283.1 | HISTONE ACETYLTRANSFERASE COMPLEX |
| CAI8034284.1 | METALLOPROTEASE TIKI |
| CAI8034285.1 | CELL CYCLE CHECKPOINT PROTEIN RAD17 |
| CAI8034286.1 | CELL CYCLE CHECKPOINT PROTEIN RAD17 |
| CAI8034288.1 | |
| CAI8034287.1 | |
| CAI8034290.1 | |
| CAI8034289.1 | |
| CAI8034292.1 | METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEIN |
| CAI8034293.1 | METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEIN |
| CAI8034291.1 | METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEIN |
| CAI8034294.1 | METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEIN |
| CAI8034295.1 | |
| CAI8034296.1 | |
| CAI8034297.1 | TIPA |
| CAI8034298.1 | TIPA |
| CAI8034301.1 | SPINDLE ASSEMBLY ABNORMAL PROTEIN 6 HOMOLOG |
| CAI8034302.1 | SPINDLE ASSEMBLY ABNORMAL PROTEIN 6 HOMOLOG |
| CAI8034300.1 | SPINDLE ASSEMBLY ABNORMAL PROTEIN 6 HOMOLOG |
| CAI8034299.1 | SPINDLE ASSEMBLY ABNORMAL PROTEIN 6 HOMOLOG |
| CAI8034303.1 | SPINDLE ASSEMBLY ABNORMAL PROTEIN 6 HOMOLOG |
| CAI8034304.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8034305.1 | |
| CAI8034306.1 | LYSYL OXIDASE-LIKE-RELATED |
| CAI8034309.1 | LYSYL OXIDASE-LIKE-RELATED |
| CAI8034308.1 | SCAVENGER RECEPTOR DOMAIN-CONTAINING |
| CAI8034307.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8034310.1 | LYSYL OXIDASE-LIKE-RELATED |
| CAI8034311.1 | AMMONIUM TRANSPORTER |
| CAI8034312.1 | TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA |
| CAI8034313.1 | |
| CAI8034316.1 | SERINE/THREONINE PROTEIN KINASE |
| CAI8034317.1 | PHOSPHATASE WITH HOMOLOGY TO TENSIN |
| CAI8034315.1 | SERINE/THREONINE PROTEIN KINASE |
| CAI8034314.1 | AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED |
| CAI8034318.1 | SERINE/THREONINE PROTEIN KINASE |
| CAI8034319.1 | SERINE/THREONINE PROTEIN KINASE |
| CAI8034320.1 | PHOSPHATASE WITH HOMOLOGY TO TENSIN |
