About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.

Classification

Animalia (Kingdom); Porifera (Phylum); Demospongiae (Class); Heteroscleromorpha (Subclass); Tetractinellida (Order); Astrophorina (Suborder); Geodiidae (Family); Geodiinae (Subfamily); Geodia (Genus); Geodia barretti (Species)

Original Name

Geodia barretti Bowerbank, 1858

Key Reference Paper

1. Bowerbank J S. On the Anatomy and Physiology of the Spongiadae[J]. Proceedings of the Royal Society of London, 1856, 8: 573-577. (Bowerbank et al., 1858)
2. Cárdenas P, Rapp H T, Klitgaard A B, et al. Taxonomy, biogeography and DNA barcodes of Geodia species (Porifera, Demospongiae, Tetractinellida) in the Atlantic boreo-arctic region[J]. Zoological Journal of the Linnean Society, 2013, 169(2): 251-311. (Cárdenas et al., 2013)

Description

the generally smooth surface (absence of hispidity and epibionts) and white colour. The irregular form, especially in specimens larger than about 15 cm in diameter. The clearly visible sieves in the sometimes numerous preoscular cavities. Spicules: usually dichotriaenes and strongylasters

Distribution

Geodia barretti has been found at depths from 30 to 2000 m.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50 48.449.319.0531,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

<< First 726 727 728 729 730 731 732 733 734 735 Forward> Last>>        3063 pages in total

Gene IDDescription
CAI8011991.1TAURINE IMPORT ATP-BINDING PROTEIN-RELATED
CAI8011992.1TAURINE IMPORT ATP-BINDING PROTEIN-RELATED
CAI8011994.1TAURINE IMPORT ATP-BINDING PROTEIN-RELATED
CAI8011993.1TAURINE IMPORT ATP-BINDING PROTEIN-RELATED
CAI8011996.1TAURINE IMPORT ATP-BINDING PROTEIN-RELATED
CAI8011995.1TAURINE IMPORT ATP-BINDING PROTEIN-RELATED
CAI8011997.1TAURINE IMPORT ATP-BINDING PROTEIN-RELATED
CAI8011998.1TAURINE IMPORT ATP-BINDING PROTEIN-RELATED
CAI8011999.1TAURINE IMPORT ATP-BINDING PROTEIN-RELATED
CAI8012000.1THIAMINE-PHOSPHATE PYROPHOSPHORYLASE
CAI8012001.1RIBOSOME MATURATION FACTOR RIMM
CAI8012003.1UPF0109 PROTEIN SCO5592
CAI8012002.1UPF0109 PROTEIN SCO5592
CAI8012004.130S RIBOSOMAL PROTEIN S16
CAI8012005.1SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54
CAI8012006.1PHAGE INTEGRASE-RELATED
CAI8012007.1ENOLASE
CAI8012008.1ENOLASE
CAI8012009.1UVRC/OXIDOREDUCTASE
CAI8012010.1UNCHARACTERIZED PROTEIN YQGE
TOP