About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50%31,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

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Gene IDDescription
CAI8033621.1PROTEIN SIDEKICK
CAI8033622.1TITIN
CAI8033623.1TITIN
CAI8033624.1
CAI8033625.1EPOXIDE HYDROLASE
CAI8033626.1
CAI8033627.1CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL
CAI8033629.1RURM1 PROTEIN
CAI8033628.1RURM1 PROTEIN
CAI8033632.1INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN,N-TERMINAL
CAI8033633.1INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN,N-TERMINAL
CAI8033630.1INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN,N-TERMINAL
CAI8033631.1INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN,N-TERMINAL
CAI8033634.1INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN,N-TERMINAL
CAI8033635.1INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN,N-TERMINAL
CAI8033636.1INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN,N-TERMINAL
CAI8033637.1
CAI8033638.1
CAI8033639.1TENASCIN
CAI8033640.1
CAI8033641.1CARBONIC ANHYDRASE
CAI8033642.1
CAI8033643.1
CAI8033644.1
CAI8033645.1CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL
CAI8033646.1EF HAND DOMAIN FAMILY A1,A2-RELATED
CAI8033647.1EF HAND DOMAIN FAMILY A1,A2-RELATED
CAI8033648.1EF HAND DOMAIN FAMILY A1,A2-RELATED
CAI8033649.1EF HAND DOMAIN FAMILY A1,A2-RELATED
CAI8033650.1EF HAND DOMAIN FAMILY A1,A2-RELATED
CAI8033652.1BONUS, ISOFORM C-RELATED
CAI8033651.1BONUS, ISOFORM C-RELATED
CAI8033653.1E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED
CAI8033654.1BONUS, ISOFORM C-RELATED
CAI8033655.1BONUS, ISOFORM C-RELATED
CAI8033656.1D-GLUTAMATE CYCLASE, MITOCHONDRIAL
CAI8033657.1D-GLUTAMATE CYCLASE, MITOCHONDRIAL
CAI8033664.1UVRABC SYSTEM PROTEIN B
CAI8033663.1UVRABC SYSTEM PROTEIN B
CAI8033661.1UVRABC SYSTEM PROTEIN B
CAI8033660.1UVRABC SYSTEM PROTEIN B
CAI8033662.1UVRABC SYSTEM PROTEIN B
CAI8033659.1UVRABC SYSTEM PROTEIN B
CAI8033658.1UVRABC SYSTEM PROTEIN B
CAI8033665.1
CAI8033666.1RIBOSOME MATURATION FACTOR RIMM
CAI8033667.1UPF0109 PROTEIN SCO5592
CAI8033668.130S RIBOSOMAL PROTEIN S16
CAI8033669.1
CAI8033672.1METHIONYL-TRNA FORMYLTRANSFERASE
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