Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8033372.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8033370.1 | |
| CAI8033373.1 | BIS(5'-ADENOSYL)-TRIPHOSPHATASE |
| CAI8033377.1 | PTERIN-4-ALPHA-CARBINOLAMINE DEHYDRATASE |
| CAI8033376.1 | PTERIN-4-ALPHA-CARBINOLAMINE DEHYDRATASE |
| CAI8033375.1 | PTERIN-4-ALPHA-CARBINOLAMINE DEHYDRATASE |
| CAI8033374.1 | PTERIN-4-ALPHA-CARBINOLAMINE DEHYDRATASE |
| CAI8033378.1 | RIBOSOMAL PROTEIN S6 KINASE |
| CAI8033379.1 | PX SERINE/THREONINE KINASE PXK |
| CAI8033380.1 | |
| CAI8033381.1 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| CAI8033382.1 | |
| CAI8033383.1 | |
| CAI8033384.1 | |
| CAI8033385.1 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
| CAI8033386.1 | |
| CAI8033387.1 | |
| CAI8033388.1 | |
| CAI8033389.1 | |
| CAI8033390.1 | UPF0602 PROTEIN C4ORF47 |
| CAI8033392.1 | UPF0602 PROTEIN C4ORF47 |
| CAI8033391.1 | UPF0602 PROTEIN C4ORF47 |
| CAI8033393.1 | UPF0602 PROTEIN C4ORF47 |
| CAI8033394.1 | PHOSPHOMETHYLPYRIMIDINE KINASE |
| CAI8033395.1 | NUCLEOTIDE KINASE |
| CAI8033396.1 | IMPORT ATP-BINDING PROTEIN |
| CAI8033397.1 | IMPORT ATP-BINDING PROTEIN |
| CAI8033398.1 | 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE |
| CAI8033399.1 | 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE |
| CAI8033400.1 | LIPOPROTEIN-RELATED |
| CAI8033401.1 | BARREL METAL-DEPENDENT HYDROLASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G16240)-RELATED |
| CAI8033402.1 | |
| CAI8033403.1 | RIBONUCLEASE P PROTEIN COMPONENT |
| CAI8033404.1 | MEMBRANE PROTEIN INSERTION EFFICIENCY FACTOR-RELATED |
| CAI8033405.1 | |
| CAI8033406.1 | OXA1 |
| CAI8033407.1 | PROTEIN JAG |
| CAI8033408.1 | ACONITATE HYDRATASE B |
| CAI8033409.1 | TRIFUNCTIONAL PURINE BIOSYNTHETIC PROTEIN ADENOSINE-3-RELATED |
| CAI8033410.1 | BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURH |
| CAI8033411.1 | BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURH |
| CAI8033412.1 | BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURH |
| CAI8033414.1 | BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURH |
| CAI8033413.1 | BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURH |
| CAI8033415.1 | BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURH |
| CAI8033416.1 | GLYCOSYL TRANSFERASE |
| CAI8033417.1 | |
| CAI8033418.1 | TMRNA-BINDING COMPONENT OF TRANS-TRANSLATION TAGGING COMPLEX |
| CAI8033419.1 | BLR3401 PROTEIN |
| CAI8033420.1 |
