Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8033071.1 | MY011 PROTEIN |
| CAI8033072.1 | MY011 PROTEIN |
| CAI8033073.1 | |
| CAI8033074.1 | SERINE/THREONINE-PROTEIN KINASE |
| CAI8033075.1 | |
| CAI8033076.1 | AUTOSOMAL HIGHLY CONSERVED PROTEIN |
| CAI8033080.1 | TUBULIN POLYGLUTAMYLASE |
| CAI8033079.1 | TUBULIN POLYGLUTAMYLASE |
| CAI8033082.1 | TUBULIN POLYGLUTAMYLASE |
| CAI8033078.1 | TUBULIN POLYGLUTAMYLASE |
| CAI8033081.1 | TUBULIN POLYGLUTAMYLASE |
| CAI8033077.1 | TUBULIN POLYGLUTAMYLASE |
| CAI8033083.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8033084.1 | |
| CAI8033085.1 | |
| CAI8033087.1 | GH11602P |
| CAI8033086.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8033088.1 | |
| CAI8033089.1 | |
| CAI8033090.1 | PYM PROTEIN |
| CAI8033091.1 | CWF19, CELL CYCLE CONTROL PROTEIN |
| CAI8033092.1 | |
| CAI8033094.1 | CALPAIN-7 |
| CAI8033093.1 | N-LINKED OLIGOSACCHARIDE PROCESSING |
| CAI8033095.1 | |
| CAI8033096.1 | |
| CAI8033097.1 | |
| CAI8033098.1 | |
| CAI8033099.1 | CALPAIN-7 |
| CAI8033100.1 | LYMPHOID-SPECIFIC HELICASE |
| CAI8033101.1 | PROTEIN CBG20567 |
| CAI8033102.1 | PROTEASOME REGULATOR PA28 |
| CAI8033103.1 | METALLOPROTEASE TLDD |
| CAI8033104.1 | METALLOPROTEASE TLDD |
| CAI8033105.1 | METALLOPROTEASE TLDD |
| CAI8033106.1 | METALLOPROTEASE TLDD |
| CAI8033110.1 | RHO/RAC/CDC GTPASE-ACTIVATING PROTEIN |
| CAI8033109.1 | RHO/RAC/CDC GTPASE-ACTIVATING PROTEIN |
| CAI8033108.1 | |
| CAI8033107.1 | |
| CAI8033111.1 | RHO/RAC/CDC GTPASE-ACTIVATING PROTEIN |
| CAI8033112.1 | RHO/RAC/CDC GTPASE-ACTIVATING PROTEIN |
| CAI8033115.1 | RHO/RAC/CDC GTPASE-ACTIVATING PROTEIN |
| CAI8033114.1 | RHO/RAC/CDC GTPASE-ACTIVATING PROTEIN |
| CAI8033113.1 | RHO/RAC/CDC GTPASE-ACTIVATING PROTEIN |
| CAI8033116.1 | TETRATRICOPEPTIDE REPEAT PROTEIN 19 |
| CAI8033119.1 | ATP-BINDING TRANSPORT PROTEIN-RELATED |
| CAI8033120.1 | ATP-BINDING TRANSPORT PROTEIN-RELATED |
| CAI8033118.1 | ATP-BINDING TRANSPORT PROTEIN-RELATED |
| CAI8033117.1 | ATP-BINDING TRANSPORT PROTEIN-RELATED |
