Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8032822.1 | CWF19, CELL CYCLE CONTROL PROTEIN |
| CAI8032821.1 | |
| CAI8032823.1 | - |
| CAI8032824.1 | - |
| CAI8032825.1 | WD40 REPEAT PROTEIN |
| CAI8032826.1 | |
| CAI8032828.1 | ADENOSYLHOMOCYSTEINASE |
| CAI8032827.1 | ADENOSYLHOMOCYSTEINASE |
| CAI8032829.1 | ADENOSYLHOMOCYSTEINASE |
| CAI8032830.1 | ADENOSYLHOMOCYSTEINASE |
| CAI8032831.1 | |
| CAI8032833.1 | GLUCOSE-6-PHOSPHATE ISOMERASE |
| CAI8032834.1 | GLUCOSE-6-PHOSPHATE ISOMERASE |
| CAI8032832.1 | GLUCOSE-6-PHOSPHATE ISOMERASE |
| CAI8032837.1 | GLUCOSE-6-PHOSPHATE ISOMERASE |
| CAI8032836.1 | GLUCOSE-6-PHOSPHATE ISOMERASE |
| CAI8032835.1 | GLUCOSE-6-PHOSPHATE ISOMERASE |
| CAI8032838.1 | GLUCOSE-6-PHOSPHATE ISOMERASE |
| CAI8032839.1 | GLUCOSE-6-PHOSPHATE ISOMERASE |
| CAI8032840.1 | U4/U6.U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 27 KDA PROTEIN |
| CAI8032841.1 | U4/U6.U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 27 KDA PROTEIN |
| CAI8032842.1 | 60S RIBOSOMAL PROTEIN L14 |
| CAI8032843.1 | |
| CAI8032848.1 | PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN |
| CAI8032845.1 | PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN |
| CAI8032846.1 | PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN |
| CAI8032844.1 | PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN |
| CAI8032847.1 | PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN |
| CAI8032849.1 | PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN |
| CAI8032851.1 | PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN |
| CAI8032850.1 | PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN |
| CAI8032852.1 | PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN |
| CAI8032853.1 | PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN |
| CAI8032854.1 | PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN |
| CAI8032855.1 | PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN |
| CAI8032856.1 | DOLICHOL-PHOSPHATE MANNOSYLTRANSFERASE SUBUNIT 1 |
| CAI8032858.1 | ANAMORSIN |
| CAI8032857.1 | ANAMORSIN |
| CAI8032859.1 | M-PHASE PHOSPHOPROTEIN 6 |
| CAI8032860.1 | DREV PROTEIN |
| CAI8032861.1 | TRANSMEMBRANE PROTEIN 64 |
| CAI8032863.1 | TUBULIN |
| CAI8032862.1 | TUBULIN |
| CAI8032864.1 | TUBULIN |
| CAI8032865.1 | NEP1/MRA1 |
| CAI8032866.1 | NEP1/MRA1 |
| CAI8032867.1 | PROTEASOME ASSEMBLY CHAPERONE 4 |
| CAI8032869.1 | UNCHARACTERIZED |
| CAI8032868.1 | |
| CAI8032871.1 |
