Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8032620.1 | |
| CAI8032622.1 | |
| CAI8032625.1 | |
| CAI8032626.1 | |
| CAI8032624.1 | |
| CAI8032623.1 | |
| CAI8032627.1 | |
| CAI8032628.1 | |
| CAI8032633.1 | |
| CAI8032634.1 | |
| CAI8032635.1 | |
| CAI8032631.1 | |
| CAI8032630.1 | |
| CAI8032632.1 | |
| CAI8032629.1 | |
| CAI8032636.1 | |
| CAI8032637.1 | |
| CAI8032638.1 | |
| CAI8032639.1 | |
| CAI8032640.1 | |
| CAI8032642.1 | |
| CAI8032641.1 | |
| CAI8032646.1 | |
| CAI8032645.1 | |
| CAI8032643.1 | |
| CAI8032644.1 | |
| CAI8032647.1 | |
| CAI8032648.1 | |
| CAI8032650.1 | ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 1 |
| CAI8032649.1 | ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 1 |
| CAI8032654.1 | |
| CAI8032651.1 | |
| CAI8032652.1 | |
| CAI8032653.1 | |
| CAI8032661.1 | |
| CAI8032656.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8032658.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8032657.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8032655.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8032662.1 | |
| CAI8032659.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8032660.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8032663.1 | |
| CAI8032665.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| CAI8032664.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| CAI8032666.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| CAI8032667.1 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
| CAI8032669.1 | 54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL |
| CAI8032668.1 | 54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL |
| CAI8032671.1 | 54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL |
