Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8032521.1 | |
| CAI8032522.1 | |
| CAI8032523.1 | S-ADENOSYL-METHYLTRANSFERASE MRAW |
| CAI8032524.1 | |
| CAI8032525.1 | UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D-ALANINE LIGASE |
| CAI8032526.1 | CELL CYCLE PROTEIN |
| CAI8032527.1 | |
| CAI8032528.1 | |
| CAI8032529.1 | CELL DIVISION PROTEIN FTSA-RELATED |
| CAI8032530.1 | CELL DIVISION PROTEIN FTSZ-RELATED |
| CAI8032531.1 | |
| CAI8032532.1 | ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED |
| CAI8032533.1 | ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED |
| CAI8032534.1 | ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED |
| CAI8032535.1 | ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED |
| CAI8032536.1 | ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED |
| CAI8032537.1 | ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED |
| CAI8032538.1 | ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED |
| CAI8032539.1 | ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED |
| CAI8032540.1 | SIGMA FACTOR F FLAGELLAR |
| CAI8032541.1 | PEPTIDASE-RELATED |
| CAI8032542.1 | SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM |
| CAI8032543.1 | |
| CAI8032544.1 | |
| CAI8032545.1 | TRANSLATION ELONGATION FACTOR G-RELATED |
| CAI8032546.1 | |
| CAI8032547.1 | TRANSLATION ELONGATION FACTOR G-RELATED |
| CAI8032548.1 | TRANSLATION ELONGATION FACTOR G-RELATED |
| CAI8032549.1 | TRANSLATION ELONGATION FACTOR G-RELATED |
| CAI8032550.1 | |
| CAI8032551.1 | |
| CAI8032552.1 | |
| CAI8032553.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8032554.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8032555.1 | |
| CAI8032556.1 | TYROSINE-PROTEIN KINASE |
| CAI8032558.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8032557.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8032559.1 | |
| CAI8032560.1 | |
| CAI8032561.1 | HELICASE WITH DEATH DOMAIN-RELATED |
| CAI8032562.1 | HELICASE WITH DEATH DOMAIN-RELATED |
| CAI8032563.1 | HELICASE WITH DEATH DOMAIN-RELATED |
| CAI8032564.1 | HELICASE WITH DEATH DOMAIN-RELATED |
| CAI8032566.1 | HELICASE WITH DEATH DOMAIN-RELATED |
| CAI8032565.1 | HELICASE WITH DEATH DOMAIN-RELATED |
| CAI8032567.1 | |
| CAI8032568.1 | |
| CAI8032569.1 | DLEC1 DELETED IN LUNG AND ESOPHAGEAL CANCER 1 |
| CAI8032570.1 |
