Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8032221.1 | AGAP000124-PA |
| CAI8032223.1 | PROTEIN DIAPHANOUS |
| CAI8032224.1 | LIM DOMAIN ONLY PROTEIN 7 |
| CAI8032222.1 | LIM DOMAIN ONLY PROTEIN 7 |
| CAI8032225.1 | CYTOCHROME C OXIDASE ASSEMBLY FACTOR 5 |
| CAI8032226.1 | ZINC FINGER PROTEIN |
| CAI8032227.1 | NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED |
| CAI8032230.1 | NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED |
| CAI8032229.1 | NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED |
| CAI8032228.1 | |
| CAI8032232.1 | GABA-B RECEPTOR |
| CAI8032231.1 | |
| CAI8032233.1 | GABA-B RECEPTOR |
| CAI8032234.1 | |
| CAI8032235.1 | |
| CAI8032239.1 | CALCIUM-INDEPENDENT PHOSPHOLIPASE A2 |
| CAI8032237.1 | CALCIUM-INDEPENDENT PHOSPHOLIPASE A2 |
| CAI8032236.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| CAI8032238.1 | CALCIUM-INDEPENDENT PHOSPHOLIPASE A2 |
| CAI8032240.1 | CALCIUM-INDEPENDENT PHOSPHOLIPASE A2 |
| CAI8032241.1 | CALCIUM-INDEPENDENT PHOSPHOLIPASE A2 |
| CAI8032242.1 | CALCIUM-INDEPENDENT PHOSPHOLIPASE A2 |
| CAI8032243.1 | VON WILLEBRAND FACTOR C AND EGF DOMAIN-CONTAINING PROTEIN |
| CAI8032244.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8032246.1 | |
| CAI8032245.1 | KELCH PROTEIN |
| CAI8032248.1 | |
| CAI8032247.1 | |
| CAI8032249.1 | |
| CAI8032250.1 | |
| CAI8032251.1 | |
| CAI8032252.1 | |
| CAI8032253.1 | |
| CAI8032264.1 | SCAVENGER RECEPTOR DOMAIN-CONTAINING |
| CAI8032262.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8032261.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8032260.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8032259.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8032263.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8032258.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8032255.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8032257.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8032256.1 | SCAVENGER RECEPTOR DOMAIN-CONTAINING |
| CAI8032254.1 | SCAVENGER RECEPTOR DOMAIN-CONTAINING |
| CAI8032265.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8032266.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8032267.1 | |
| CAI8032268.1 | |
| CAI8032269.1 | |
| CAI8032270.1 |
