Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8032123.1 | PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE |
| CAI8032122.1 | PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE |
| CAI8032121.1 | PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE |
| CAI8032125.1 | TYROSYL-TRNA SYNTHETASE |
| CAI8032124.1 | TYROSYL-TRNA SYNTHETASE |
| CAI8032127.1 | TYROSYL-TRNA SYNTHETASE |
| CAI8032126.1 | TYROSYL-TRNA SYNTHETASE |
| CAI8032128.1 | TYROSYL-TRNA SYNTHETASE |
| CAI8032129.1 | SLL0198 PROTEIN-RELATED |
| CAI8032130.1 | METHYLMALONYL-COA MUTASE, MITOCHONDRIAL-RELATED |
| CAI8032131.1 | METHYLMALONYL-COA MUTASE, MITOCHONDRIAL-RELATED |
| CAI8032132.1 | TRANSLATION ELONGATION FACTOR G-RELATED |
| CAI8032134.1 | RIBONUCLEASE H1 |
| CAI8032133.1 | RIBONUCLEASE H1 |
| CAI8032135.1 | BLL0828 PROTEIN |
| CAI8032136.1 | |
| CAI8032137.1 | NUDIX HYDROLASE, NUDC SUBFAMILY |
| CAI8032140.1 | ACETYL-COENZYME A SYNTHETASE |
| CAI8032139.1 | ACETYL-COENZYME A SYNTHETASE |
| CAI8032138.1 | ACETYL-COENZYME A SYNTHETASE |
| CAI8032141.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8032142.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8032143.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8032144.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8032145.1 | |
| CAI8032146.1 | |
| CAI8032147.1 | |
| CAI8032148.1 | |
| CAI8032149.1 | |
| CAI8032150.1 | |
| CAI8032151.1 | |
| CAI8032152.1 | |
| CAI8032153.1 | |
| CAI8032154.1 | |
| CAI8032155.1 | |
| CAI8032156.1 | 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER |
| CAI8032158.1 | PROTEIN NJMU-R1 |
| CAI8032157.1 | PROTEIN NJMU-R1 |
| CAI8032159.1 | |
| CAI8032160.1 | |
| CAI8032164.1 | SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED |
| CAI8032163.1 | SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED |
| CAI8032162.1 | SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED |
| CAI8032161.1 | |
| CAI8032165.1 | SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED |
| CAI8032167.1 | SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED |
| CAI8032166.1 | SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED |
| CAI8032168.1 | SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED |
| CAI8032169.1 | |
| CAI8032170.1 |
