About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50%31,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

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Gene IDDescription
CAI8031821.1
CAI8031822.1
CAI8031823.1
CAI8031824.1INTELECTIN
CAI8031828.1
CAI8031829.1
CAI8031827.1
CAI8031826.1
CAI8031825.1
CAI8031830.1
CAI8031831.1REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
CAI8031832.1BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASE
CAI8031833.1
CAI8031834.1
CAI8031835.1
CAI8031848.1UNCHARACTERIZED
CAI8031847.1UNCHARACTERIZED
CAI8031845.1UNCHARACTERIZED
CAI8031846.1UNCHARACTERIZED
CAI8031844.1UNCHARACTERIZED
CAI8031842.1UNCHARACTERIZED
CAI8031841.1UNCHARACTERIZED
CAI8031840.1UNCHARACTERIZED
CAI8031839.1UNCHARACTERIZED
CAI8031838.1UNCHARACTERIZED
CAI8031837.1
CAI8031843.1UNCHARACTERIZED
CAI8031849.1UNCHARACTERIZED
CAI8031850.1UNCHARACTERIZED
CAI8031851.1
CAI8031836.1
CAI8031853.1
CAI8031852.1
CAI8031854.1
CAI8031855.1
CAI8031856.1
CAI8031857.1
CAI8031858.1
CAI8031859.1
CAI8031862.1VASCULAR CELL ADHESION MOLECULE 1
CAI8031861.1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
CAI8031860.1
CAI8031863.1CONTACTIN 5
CAI8031864.1VASCULAR CELL ADHESION MOLECULE 1
CAI8031865.1
CAI8031866.1VASCULAR CELL ADHESION MOLECULE 1
CAI8031867.1
CAI8031868.1UBIQUITIN
CAI8031869.1
CAI8031870.1
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