Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8031673.1 | UNCHARACTERIZED |
| CAI8031672.1 | UNCHARACTERIZED |
| CAI8031671.1 | UNCHARACTERIZED |
| CAI8031674.1 | |
| CAI8031676.1 | PROTEIN-LYSINE N-METHYLTRANSFERASE METTL10 |
| CAI8031675.1 | PROTEIN-LYSINE N-METHYLTRANSFERASE METTL10 |
| CAI8031678.1 | DALRD3 PROTEIN |
| CAI8031677.1 | DALRD3 PROTEIN |
| CAI8031679.1 | DALRD3 PROTEIN |
| CAI8031680.1 | |
| CAI8031681.1 | |
| CAI8031682.1 | GLUTAMATE RECEPTOR-INTERACTING PROTEIN GRIP |
| CAI8031683.1 | GLUTAMATE RECEPTOR-INTERACTING PROTEIN GRIP |
| CAI8031684.1 | GLUTAMATE RECEPTOR-INTERACTING PROTEIN GRIP |
| CAI8031685.1 | GLUTAMATE RECEPTOR-INTERACTING PROTEIN GRIP |
| CAI8031687.1 | GLUTAMATE RECEPTOR-INTERACTING PROTEIN GRIP |
| CAI8031686.1 | GLUTAMATE RECEPTOR-INTERACTING PROTEIN GRIP |
| CAI8031688.1 | GLUTAMATE RECEPTOR-INTERACTING PROTEIN GRIP |
| CAI8031693.1 | ANAPHASE PROMOTING COMPLEX SUBUNIT 4 APC4 |
| CAI8031692.1 | ANAPHASE PROMOTING COMPLEX SUBUNIT 4 APC4 |
| CAI8031691.1 | ANAPHASE PROMOTING COMPLEX SUBUNIT 4 APC4 |
| CAI8031694.1 | ANAPHASE PROMOTING COMPLEX SUBUNIT 4 APC4 |
| CAI8031690.1 | ANAPHASE PROMOTING COMPLEX SUBUNIT 4 APC4 |
| CAI8031689.1 | ANAPHASE PROMOTING COMPLEX SUBUNIT 4 APC4 |
| CAI8031696.1 | ANAPHASE PROMOTING COMPLEX SUBUNIT 4 APC4 |
| CAI8031695.1 | ANAPHASE PROMOTING COMPLEX SUBUNIT 4 APC4 |
| CAI8031697.1 | ANAPHASE PROMOTING COMPLEX SUBUNIT 4 APC4 |
| CAI8031698.1 | ANAPHASE PROMOTING COMPLEX SUBUNIT 4 APC4 |
| CAI8031703.1 | TYROSINE PHOSPHATSE N18, PUTATIVE-RELATED |
| CAI8031702.1 | TYROSINE PHOSPHATSE N18, PUTATIVE-RELATED |
| CAI8031701.1 | GRAM DOMAIN-CONTAINING PROTEIN 4 |
| CAI8031700.1 | GRAM DOMAIN-CONTAINING PROTEIN 4 |
| CAI8031699.1 | GRAM DOMAIN-CONTAINING PROTEIN 4 |
| CAI8031704.1 | GRAM DOMAIN-CONTAINING PROTEIN 4 |
| CAI8031705.1 | TYROSINE PHOSPHATSE N18, PUTATIVE-RELATED |
| CAI8031706.1 | SPHINGOSINE KINASE |
| CAI8031707.1 | |
| CAI8031708.1 | |
| CAI8031709.1 | |
| CAI8031710.1 | |
| CAI8031711.1 | |
| CAI8031713.1 | PROPIONYL-COA CARBOXYLASE BETA CHAIN |
| CAI8031712.1 | PROPIONYL-COA CARBOXYLASE BETA CHAIN |
| CAI8031714.1 | |
| CAI8031715.1 | |
| CAI8031716.1 | |
| CAI8031717.1 | |
| CAI8031718.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
| CAI8031719.1 | ANKYRIN REPEAT CONTAINING |
| CAI8031721.1 |
