Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8031371.1 | CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED |
| CAI8031372.1 | |
| CAI8031374.1 | PHOSPHATIDYLINOSITOL KINASE |
| CAI8031373.1 | PHOSPHATIDYLINOSITOL KINASE |
| CAI8031375.1 | SPLICING FACTOR 3B |
| CAI8031376.1 | PHOSPHATIDYLINOSITOL KINASE |
| CAI8031378.1 | |
| CAI8031379.1 | |
| CAI8031377.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8031380.1 | PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASE |
| CAI8031381.1 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
| CAI8031382.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8031383.1 | |
| CAI8031384.1 | |
| CAI8031385.1 | |
| CAI8031386.1 | GABA-B RECEPTOR |
| CAI8031387.1 | REVERSE TRANSCRIPTASES |
| CAI8031388.1 | |
| CAI8031389.1 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT |
| CAI8031390.1 | SLD5 PROTEIN |
| CAI8031391.1 | SLD5 PROTEIN |
| CAI8031392.1 | 30S RIBOSOMAL PROTEIN S14 |
| CAI8031393.1 | |
| CAI8031394.1 | CARBOHYDRATE SULFOTRANSFERASE 15 |
| CAI8031398.1 | HERMANSKY-PUDLAK SYNDROME PROTEIN 1 |
| CAI8031399.1 | HERMANSKY-PUDLAK SYNDROME PROTEIN 1 |
| CAI8031397.1 | HERMANSKY-PUDLAK SYNDROME PROTEIN 1 |
| CAI8031396.1 | HERMANSKY-PUDLAK SYNDROME PROTEIN 1 |
| CAI8031395.1 | HERMANSKY-PUDLAK SYNDROME PROTEIN 1 |
| CAI8031400.1 | |
| CAI8031401.1 | HERMANSKY-PUDLAK SYNDROME PROTEIN 1 |
| CAI8031402.1 | PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1 |
| CAI8031403.1 | 26S PROTESOME SUBUNIT 6 |
| CAI8031404.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8031406.1 | TRANSFORMING ACIDIC COILED-COIL CONTAINING PROTEIN 1/2 |
| CAI8031405.1 | TRANSFORMING ACIDIC COILED-COIL CONTAINING PROTEIN 1/2 |
| CAI8031407.1 | |
| CAI8031408.1 | |
| CAI8031409.1 | GROWTH INHIBITION AND DIFFERENTIATION RELATED PROTEIN 88 |
| CAI8031411.1 | UNCHARACTERIZED |
| CAI8031410.1 | PHOSPHOMANNOMUTASE |
| CAI8031412.1 | |
| CAI8031419.1 | AGAP001623-PA |
| CAI8031418.1 | AGAP001623-PA |
| CAI8031417.1 | AGAP001623-PA |
| CAI8031416.1 | AGAP001623-PA |
| CAI8031415.1 | AGAP001623-PA |
| CAI8031414.1 | |
| CAI8031413.1 | |
| CAI8031420.1 | AGAP001623-PA |
