Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8031076.1 | |
| CAI8031073.1 | |
| CAI8031072.1 | |
| CAI8031071.1 | |
| CAI8031070.1 | |
| CAI8031074.1 | |
| CAI8031077.1 | |
| CAI8031078.1 | |
| CAI8031079.1 | |
| CAI8031080.1 | |
| CAI8031081.1 | |
| CAI8031082.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8031085.1 | IGGFC_BINDING DOMAIN-CONTAINING PROTEIN |
| CAI8031084.1 | IGGFC_BINDING DOMAIN-CONTAINING PROTEIN |
| CAI8031083.1 | EPH RECEPTOR A5 |
| CAI8031086.1 | IGGFC_BINDING DOMAIN-CONTAINING PROTEIN |
| CAI8031088.1 | IGGFC_BINDING DOMAIN-CONTAINING PROTEIN |
| CAI8031087.1 | EPH RECEPTOR A5 |
| CAI8031091.1 | IGGFC_BINDING DOMAIN-CONTAINING PROTEIN |
| CAI8031090.1 | IGGFC_BINDING DOMAIN-CONTAINING PROTEIN |
| CAI8031089.1 | IGGFC_BINDING DOMAIN-CONTAINING PROTEIN |
| CAI8031092.1 | |
| CAI8031093.1 | |
| CAI8031094.1 | |
| CAI8031095.1 | |
| CAI8031096.1 | |
| CAI8031097.1 | |
| CAI8031102.1 | TRANSCRIPTION TERMINATION FACTOR RHO |
| CAI8031101.1 | TRANSCRIPTION TERMINATION FACTOR RHO |
| CAI8031100.1 | TRANSCRIPTION TERMINATION FACTOR RHO |
| CAI8031099.1 | TRANSCRIPTION TERMINATION FACTOR RHO |
| CAI8031098.1 | TRANSCRIPTION TERMINATION FACTOR RHO |
| CAI8031103.1 | CTP SYNTHASE |
| CAI8031104.1 | SECRETED GLYCOSYL HYDROLASE |
| CAI8031105.1 | 2-KETO-3-DEOXY-L-RHAMNONATE ALDOLASE |
| CAI8031106.1 | BCDNA.GH03377 |
| CAI8031108.1 | CYCLIN-DEPENDENT KINASE INHIBITOR 2C-RELATED |
| CAI8031107.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
| CAI8031109.1 | |
| CAI8031110.1 | |
| CAI8031111.1 | |
| CAI8031112.1 | AROM/DEHYDROQUINATE SYNTHASE |
| CAI8031113.1 | AROM/DEHYDROQUINATE SYNTHASE |
| CAI8031114.1 | ATP-DEPENDENT RNA AND DNA HELICASE |
| CAI8031115.1 | |
| CAI8031116.1 | PBS LYASE HEAT-LIKE PROTEIN |
| CAI8031117.1 | PBS LYASE HEAT-LIKE PROTEIN |
| CAI8031118.1 | N-(5'-PHOSPHORIBOSYL)ANTHRANILATE ISOMERASE |
| CAI8031119.1 | |
| CAI8031120.1 | AMMONIUM TRANSPORTER |
