Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8030771.1 | |
| CAI8030772.1 | |
| CAI8030773.1 | PROTEIN CBG23806 |
| CAI8030774.1 | |
| CAI8030775.1 | |
| CAI8030776.1 | |
| CAI8030777.1 | GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE |
| CAI8030778.1 | NADH-QUINONE OXIDOREDUCTASE SUBUNIT F |
| CAI8030779.1 | SODIUM/CALCIUM EXCHANGER |
| CAI8030780.1 | |
| CAI8030781.1 | |
| CAI8030782.1 | |
| CAI8030783.1 | SODIUM/CALCIUM EXCHANGER |
| CAI8030784.1 | |
| CAI8030785.1 | |
| CAI8030791.1 | UNCHARACTERIZED |
| CAI8030789.1 | UNCHARACTERIZED |
| CAI8030788.1 | UNCHARACTERIZED |
| CAI8030786.1 | UNCHARACTERIZED |
| CAI8030787.1 | UNCHARACTERIZED |
| CAI8030792.1 | UNCHARACTERIZED |
| CAI8030790.1 | UNCHARACTERIZED |
| CAI8030793.1 | UNCHARACTERIZED |
| CAI8030794.1 | UNCHARACTERIZED |
| CAI8030795.1 | |
| CAI8030796.1 | |
| CAI8030797.1 | |
| CAI8030798.1 | |
| CAI8030803.1 | NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1 |
| CAI8030802.1 | NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1 |
| CAI8030801.1 | |
| CAI8030800.1 | NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1 |
| CAI8030799.1 | NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1 |
| CAI8030804.1 | NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1 |
| CAI8030805.1 | |
| CAI8030810.1 | |
| CAI8030808.1 | LEISHMANOLYSIN-LIKE PEPTIDASE |
| CAI8030807.1 | LEISHMANOLYSIN-LIKE PEPTIDASE |
| CAI8030806.1 | |
| CAI8030809.1 | LEISHMANOLYSIN-LIKE PEPTIDASE |
| CAI8030811.1 | ATP SYNTHASE SUBUNIT |
| CAI8030814.1 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
| CAI8030816.1 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
| CAI8030815.1 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
| CAI8030813.1 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
| CAI8030812.1 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
| CAI8030818.1 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
| CAI8030817.1 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
| CAI8030819.1 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
| CAI8030820.1 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
