Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8030471.1 | TRANSPORTER ARSB-RELATED |
| CAI8030473.1 | |
| CAI8030472.1 | |
| CAI8030474.1 | |
| CAI8030475.1 | |
| CAI8030476.1 | S-METHYL-5'-THIOADENOSINE PHOSPHORYLASE |
| CAI8030477.1 | CALCYPHOSIN |
| CAI8030480.1 | ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT |
| CAI8030479.1 | ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT |
| CAI8030478.1 | ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT |
| CAI8030481.1 | ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT |
| CAI8030482.1 | BAP28 |
| CAI8030483.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G |
| CAI8030484.1 | PEPTIDYL-TRNA HYDROLASE 2 |
| CAI8030491.1 | CHIMERIN FAMILY MEMBER |
| CAI8030489.1 | CHIMERIN FAMILY MEMBER |
| CAI8030490.1 | PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT |
| CAI8030488.1 | CHIMERIN FAMILY MEMBER |
| CAI8030487.1 | CHIMERIN FAMILY MEMBER |
| CAI8030486.1 | PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT |
| CAI8030485.1 | |
| CAI8030492.1 | CHIMERIN FAMILY MEMBER |
| CAI8030495.1 | NARDILYSIN |
| CAI8030494.1 | NARDILYSIN |
| CAI8030493.1 | NARDILYSIN |
| CAI8030496.1 | NARDILYSIN |
| CAI8030497.1 | NARDILYSIN |
| CAI8030498.1 | ADHESION G-PROTEIN COUPLED RECEPTOR V1 |
| CAI8030499.1 | ADHESION G-PROTEIN COUPLED RECEPTOR V1 |
| CAI8030500.1 | |
| CAI8030501.1 | SUGAR NUCLEOTIDE EPIMERASE RELATED |
| CAI8030502.1 | SUGAR NUCLEOTIDE EPIMERASE RELATED |
| CAI8030503.1 | DEOXYCYTIDYLATE DEAMINASE-RELATED |
| CAI8030505.1 | |
| CAI8030506.1 | |
| CAI8030504.1 | |
| CAI8030508.1 | |
| CAI8030507.1 | |
| CAI8030511.1 | LIM DOMAIN-CONTAINING PROTEIN |
| CAI8030513.1 | LIM DOMAIN-CONTAINING PROTEIN |
| CAI8030512.1 | LIM DOMAIN-CONTAINING PROTEIN |
| CAI8030510.1 | LIM DOMAIN-CONTAINING PROTEIN |
| CAI8030509.1 | LIM DOMAIN-CONTAINING PROTEIN |
| CAI8030514.1 | LIM DOMAIN-CONTAINING PROTEIN |
| CAI8030516.1 | ADP-RIBOSYLGLYCOHYDROLASE |
| CAI8030517.1 | ADP-RIBOSYLGLYCOHYDROLASE |
| CAI8030515.1 | ADP-RIBOSYLGLYCOHYDROLASE |
| CAI8030520.1 | SORTILIN RELATED |
| CAI8030525.1 | SORTILIN RELATED |
| CAI8030519.1 | SORTILIN RELATED |
