Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8030322.1 | SPHINGOMYELIN PHOSPHODIESTERASE |
| CAI8030321.1 | |
| CAI8030323.1 | SPHINGOMYELIN PHOSPHODIESTERASE |
| CAI8030324.1 | SPHINGOMYELIN PHOSPHODIESTERASE |
| CAI8030325.1 | SPHINGOMYELIN PHOSPHODIESTERASE |
| CAI8030326.1 | SPHINGOMYELIN PHOSPHODIESTERASE |
| CAI8030330.1 | GLYCEROL-3-PHOSPHATE DEHYDROGENASE |
| CAI8030329.1 | GLYCEROL-3-PHOSPHATE DEHYDROGENASE |
| CAI8030328.1 | GLYCEROL-3-PHOSPHATE DEHYDROGENASE |
| CAI8030331.1 | |
| CAI8030332.1 | GLYCEROL-3-PHOSPHATE DEHYDROGENASE |
| CAI8030327.1 | SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS |
| CAI8030334.1 | INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN-RELATED |
| CAI8030333.1 | INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN-RELATED |
| CAI8030335.1 | |
| CAI8030336.1 | |
| CAI8030337.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8030338.1 | |
| CAI8030339.1 | |
| CAI8030340.1 | |
| CAI8030341.1 | |
| CAI8030342.1 | |
| CAI8030343.1 | |
| CAI8030344.1 | |
| CAI8030345.1 | |
| CAI8030346.1 | |
| CAI8030347.1 | |
| CAI8030348.1 | |
| CAI8030349.1 | |
| CAI8030350.1 | |
| CAI8030351.1 | |
| CAI8030352.1 | |
| CAI8030354.1 | |
| CAI8030353.1 | |
| CAI8030356.1 | |
| CAI8030355.1 | |
| CAI8030357.1 | |
| CAI8030358.1 | |
| CAI8030359.1 | |
| CAI8030360.1 | |
| CAI8030361.1 | |
| CAI8030362.1 | |
| CAI8030364.1 | CENTROSOMAL PROTEIN OF 85 KDA |
| CAI8030363.1 | CENTROSOMAL PROTEIN OF 85 KDA |
| CAI8030365.1 | CENTROSOMAL PROTEIN OF 85 KDA |
| CAI8030366.1 | |
| CAI8030367.1 | |
| CAI8030368.1 | GH17980P-RELATED |
| CAI8030372.1 | UNCHARACTERIZED DUF1167 |
| CAI8030373.1 | UNCHARACTERIZED DUF1167 |
