About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.

Classification

Animalia (Kingdom); Porifera (Phylum); Demospongiae (Class); Heteroscleromorpha (Subclass); Tetractinellida (Order); Astrophorina (Suborder); Geodiidae (Family); Geodiinae (Subfamily); Geodia (Genus); Geodia barretti (Species)

Original Name

Geodia barretti Bowerbank, 1858

Key Reference Paper

1. Bowerbank J S. On the Anatomy and Physiology of the Spongiadae[J]. Proceedings of the Royal Society of London, 1856, 8: 573-577. (Bowerbank et al., 1858)
2. Cárdenas P, Rapp H T, Klitgaard A B, et al. Taxonomy, biogeography and DNA barcodes of Geodia species (Porifera, Demospongiae, Tetractinellida) in the Atlantic boreo-arctic region[J]. Zoological Journal of the Linnean Society, 2013, 169(2): 251-311. (Cárdenas et al., 2013)

Description

the generally smooth surface (absence of hispidity and epibionts) and white colour. The irregular form, especially in specimens larger than about 15 cm in diameter. The clearly visible sieves in the sometimes numerous preoscular cavities. Spicules: usually dichotriaenes and strongylasters

Distribution

Geodia barretti has been found at depths from 30 to 2000 m.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50 48.449.319.0531,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

<< First 650 651 652 653 654 655 656 657 658 659 Forward> Last>>        3063 pages in total

Gene IDDescription
CAI8010471.1DEHYDROGENASES, SHORT CHAIN
CAI8010472.1GERANYLGERANYL PYROPHOSPHATE SYNTHASE
CAI8010473.1BIFUNCTIONAL LYCOPENE CYCLASE/PHYTOENE SYNTHASE
CAI8010474.1-
CAI8010475.1-
CAI8010476.1ACYL-COA DEHYDROGENASE
CAI8010477.1ASPARTATE AMINOTRANSFERASE
CAI8010478.1ARGININOSUCCINATE SYNTHASE
CAI8010479.1ARGININOSUCCINATE SYNTHASE
CAI8010480.1AMINOTRANSFERASE CLASS III
CAI8010481.1AMINOTRANSFERASE CLASS III
CAI8010483.1N-ACETYLGLUTAMATE SYNTHASE
CAI8010484.1N-ACETYLGLUTAMATE SYNTHASE
CAI8010482.1N-ACETYLGLUTAMATE SYNTHASE
CAI8010485.1ARGININE BIOSYNTHESIS BIFUNCTIONAL PROTEIN ARGJ
CAI8010486.1ENOYL-COA HYDRATASE-RELATED
CAI8010487.1PROTEIN ABHD11
CAI8010488.1-
CAI8010489.1-
CAI8010490.1BNAUNNG04460D PROTEIN-RELATED
TOP