Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8029971.1 | TITIN |
| CAI8029972.1 | |
| CAI8029973.1 | |
| CAI8029974.1 | |
| CAI8029975.1 | LD33804P |
| CAI8029976.1 | MYCOPHENOLIC ACID ACYL-GLUCURONIDE ESTERASE, MITOCHONDRIAL |
| CAI8029985.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2C |
| CAI8029984.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2C |
| CAI8029983.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2C |
| CAI8029982.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2C |
| CAI8029981.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2C |
| CAI8029980.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2C |
| CAI8029979.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2C |
| CAI8029978.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2C |
| CAI8029977.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2C |
| CAI8029987.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2C |
| CAI8029986.1 | |
| CAI8029988.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2C |
| CAI8029989.1 | |
| CAI8029990.1 | KYNURENINASE |
| CAI8029991.1 | KYNURENINASE |
| CAI8029992.1 | |
| CAI8029993.1 | |
| CAI8029994.1 | |
| CAI8030000.1 | RYANODINE RECEPTOR AND IP3 RECEPTOR |
| CAI8029999.1 | RYANODINE RECEPTOR AND IP3 RECEPTOR |
| CAI8030001.1 | RYANODINE RECEPTOR AND IP3 RECEPTOR |
| CAI8029998.1 | RYANODINE RECEPTOR AND IP3 RECEPTOR |
| CAI8029997.1 | RYANODINE RECEPTOR AND IP3 RECEPTOR |
| CAI8029996.1 | RYANODINE RECEPTOR AND IP3 RECEPTOR |
| CAI8029995.1 | RYANODINE RECEPTOR AND IP3 RECEPTOR |
| CAI8030002.1 | RYANODINE RECEPTOR AND IP3 RECEPTOR |
| CAI8030006.1 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
| CAI8030005.1 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
| CAI8030004.1 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
| CAI8030003.1 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
| CAI8030007.1 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
| CAI8030008.1 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
| CAI8030009.1 | |
| CAI8030011.1 | |
| CAI8030012.1 | |
| CAI8030010.1 | |
| CAI8030013.1 | |
| CAI8030015.1 | PROTEIN DISULFIDE ISOMERASE |
| CAI8030016.1 | PROTEIN DISULFIDE ISOMERASE |
| CAI8030014.1 | FORKHEAD BOX PROTEIN N3-LIKE PROTEIN-RELATED |
| CAI8030020.1 | SENTRIN/SUMO-SPECIFIC PROTEASE |
| CAI8030019.1 | |
| CAI8030018.1 | SENTRIN/SUMO-SPECIFIC PROTEASE |
| CAI8030017.1 | SENTRIN/SUMO-SPECIFIC PROTEASE |
