Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8030421.1 | CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE |
| CAI8030422.1 | CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE |
| CAI8030426.1 | OXIDOREDUCTASE-RELATED |
| CAI8030425.1 | OXIDOREDUCTASE-RELATED |
| CAI8030424.1 | OXIDOREDUCTASE-RELATED |
| CAI8030423.1 | OXIDOREDUCTASE-RELATED |
| CAI8030427.1 | OXIDOREDUCTASE-RELATED |
| CAI8030428.1 | PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 |
| CAI8030430.1 | PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 |
| CAI8030429.1 | PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 |
| CAI8030431.1 | ATP-DEPENDENT DNA HELICASE |
| CAI8030432.1 | UNCHARACTERIZED |
| CAI8030434.1 | |
| CAI8030433.1 | KINESIN-RELATED |
| CAI8030435.1 | T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN |
| CAI8030436.1 | ALPHA-1,3/1,6-MANNOSYLTRANSFERASE ALG2 |
| CAI8030437.1 | METABOTROPIC GLUTAMATE RECEPTOR |
| CAI8030440.1 | ATP-DEPENDENT RNA HELICASE |
| CAI8030439.1 | ATP-DEPENDENT RNA HELICASE |
| CAI8030438.1 | ATP-DEPENDENT RNA HELICASE |
| CAI8030441.1 | ATP-DEPENDENT RNA HELICASE |
| CAI8030442.1 | ATP-DEPENDENT RNA HELICASE |
| CAI8030443.1 | ATP-DEPENDENT RNA HELICASE |
| CAI8030444.1 | ATP-DEPENDENT RNA HELICASE |
| CAI8030446.1 | ATP-DEPENDENT RNA HELICASE |
| CAI8030445.1 | ATP-DEPENDENT RNA HELICASE |
| CAI8030447.1 | |
| CAI8030448.1 | |
| CAI8030449.1 | RAB GDP-DISSOCIATION INHIBITOR |
| CAI8030450.1 | EXPORTIN-T/LOS1 |
| CAI8030453.1 | EXPORTIN-T/LOS1 |
| CAI8030454.1 | EXPORTIN-T/LOS1 |
| CAI8030451.1 | EXPORTIN-T/LOS1 |
| CAI8030455.1 | EXPORTIN-T/LOS1 |
| CAI8030452.1 | EXPORTIN-T/LOS1 |
| CAI8030456.1 | EXPORTIN-T/LOS1 |
| CAI8030457.1 | EXPORTIN-T/LOS1 |
| CAI8030459.1 | EXPORTIN-T/LOS1 |
| CAI8030458.1 | EXPORTIN-T/LOS1 |
| CAI8030460.1 | |
| CAI8030461.1 | |
| CAI8030462.1 | |
| CAI8030464.1 | TESTIS-EXPRESSED PROTEIN 264 |
| CAI8030463.1 | TESTIS-EXPRESSED PROTEIN 264 |
| CAI8030465.1 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| CAI8030466.1 | EGF-LIKE-DOMAIN, MULTIPLE 7, 8 |
| CAI8030467.1 | EGF-LIKE-DOMAIN, MULTIPLE 7, 8 |
| CAI8030468.1 | |
| CAI8030469.1 | TRANSPORTER ARSB-RELATED |
| CAI8030470.1 | TRANSPORTER ARSB-RELATED |
