Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8031720.1 | |
| CAI8031722.1 | |
| CAI8031723.1 | |
| CAI8031724.1 | |
| CAI8031725.1 | |
| CAI8031726.1 | CYTOKINE RECEPTOR |
| CAI8031729.1 | CYTOKINE RECEPTOR |
| CAI8031728.1 | CYTOKINE RECEPTOR |
| CAI8031727.1 | CYTOKINE RECEPTOR |
| CAI8031730.1 | PROTEIN SIDEKICK |
| CAI8031731.1 | RHO FAMILY GTPASE |
| CAI8031732.1 | |
| CAI8031733.1 | |
| CAI8031734.1 | |
| CAI8031737.1 | DEDICATOR OF CYTOKINESIS DOCK |
| CAI8031736.1 | DEDICATOR OF CYTOKINESIS DOCK |
| CAI8031735.1 | DEDICATOR OF CYTOKINESIS DOCK |
| CAI8031738.1 | DEDICATOR OF CYTOKINESIS DOCK |
| CAI8031739.1 | DEDICATOR OF CYTOKINESIS DOCK |
| CAI8031740.1 | DEDICATOR OF CYTOKINESIS DOCK |
| CAI8031742.1 | DEDICATOR OF CYTOKINESIS DOCK |
| CAI8031741.1 | DEDICATOR OF CYTOKINESIS DOCK |
| CAI8031744.1 | |
| CAI8031743.1 | |
| CAI8031745.1 | |
| CAI8031746.1 | PROTEIN CBG16427 |
| CAI8031747.1 | PROTEIN CBG16427 |
| CAI8031750.1 | ACETYL-COENZYME A SYNTHETASE |
| CAI8031749.1 | ACETYL-COENZYME A SYNTHETASE |
| CAI8031748.1 | ACETYL-COENZYME A SYNTHETASE |
| CAI8031753.1 | ACETYL-COENZYME A SYNTHETASE |
| CAI8031755.1 | ACETYL-COENZYME A SYNTHETASE |
| CAI8031751.1 | ACETYL-COENZYME A SYNTHETASE |
| CAI8031752.1 | ACETYL-COENZYME A SYNTHETASE |
| CAI8031754.1 | ACETYL-COENZYME A SYNTHETASE |
| CAI8031756.1 | ACETYL-COENZYME A SYNTHETASE |
| CAI8031760.1 | |
| CAI8031757.1 | ACETYL-COENZYME A SYNTHETASE |
| CAI8031759.1 | ACETYL-COENZYME A SYNTHETASE |
| CAI8031758.1 | ACETYL-COENZYME A SYNTHETASE |
| CAI8031761.1 | |
| CAI8031763.1 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| CAI8031762.1 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| CAI8031767.1 | TENASCIN |
| CAI8031766.1 | |
| CAI8031765.1 | |
| CAI8031764.1 | |
| CAI8031769.1 | TENASCIN |
| CAI8031768.1 | |
| CAI8031770.1 |
