Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8032321.1 | PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE |
| CAI8032322.1 | KU AUTOANTIGEN DNA HELICASE |
| CAI8032323.1 | KU AUTOANTIGEN DNA HELICASE |
| CAI8032324.1 | KU AUTOANTIGEN DNA HELICASE |
| CAI8032325.1 | KU AUTOANTIGEN DNA HELICASE |
| CAI8032326.1 | EF-HAND DOMAIN C-TERMINAL CONTAINING PROTEIN |
| CAI8032327.1 | |
| CAI8032328.1 | 39S RIBOSOMAL PROTEIN L53, MITOCHONDRIAL |
| CAI8032329.1 | SERINE/THREONINE-PROTEIN KINASE DOA-RELATED |
| CAI8032330.1 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN |
| CAI8032332.1 | TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 |
| CAI8032333.1 | TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 |
| CAI8032331.1 | TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 |
| CAI8032334.1 | TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 |
| CAI8032336.1 | ORGANIC ANION TRANSPORTER |
| CAI8032335.1 | ORGANIC ANION TRANSPORTER |
| CAI8032337.1 | ORGANIC ANION TRANSPORTER |
| CAI8032338.1 | ORGANIC ANION TRANSPORTER |
| CAI8032339.1 | |
| CAI8032340.1 | |
| CAI8032341.1 | |
| CAI8032343.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8032342.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8032344.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8032350.1 | |
| CAI8032349.1 | |
| CAI8032347.1 | |
| CAI8032348.1 | |
| CAI8032346.1 | |
| CAI8032345.1 | |
| CAI8032351.1 | |
| CAI8032352.1 | CYSTEINE DESULFURYLASE FAMILY MEMBER |
| CAI8032353.1 | CHROMOSOME 20 ORF85 FAMILY MEMBER |
| CAI8032354.1 | TETRATRICOPEPTIDE REPEAT PROTEIN 32 |
| CAI8032355.1 | |
| CAI8032356.1 | |
| CAI8032358.1 | |
| CAI8032357.1 | |
| CAI8032359.1 | |
| CAI8032360.1 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| CAI8032361.1 | |
| CAI8032362.1 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| CAI8032365.1 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| CAI8032364.1 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| CAI8032363.1 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| CAI8032366.1 | |
| CAI8032367.1 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| CAI8032368.1 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| CAI8032369.1 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| CAI8032370.1 | CYSTEINE PROTEASE FAMILY C1-RELATED |
