Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8032571.1 | CHRONIC MYELOGENOUS LEUKEMIA TUMOR ANTIGEN 66 |
| CAI8032573.1 | METALLOPROTEASE TLDD |
| CAI8032572.1 | METALLOPROTEASE TLDD |
| CAI8032574.1 | DNA HELICASE RECQ FAMILY MEMBER |
| CAI8032575.1 | UNCHARACTERIZED |
| CAI8032576.1 | NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-A SUBUNIT |
| CAI8032577.1 | |
| CAI8032578.1 | |
| CAI8032579.1 | RIKEN CDNA 6820408C15 |
| CAI8032581.1 | VACUOLAR SORTING PROTEIN 35 |
| CAI8032580.1 | VACUOLAR SORTING PROTEIN 35 |
| CAI8032583.1 | VACUOLAR SORTING PROTEIN 35 |
| CAI8032582.1 | VACUOLAR SORTING PROTEIN 35 |
| CAI8032584.1 | VACUOLAR SORTING PROTEIN 35 |
| CAI8032585.1 | |
| CAI8032586.1 | |
| CAI8032587.1 | |
| CAI8032588.1 | |
| CAI8032589.1 | |
| CAI8032591.1 | ATP-CITRATE SYNTHASE |
| CAI8032590.1 | ATP-CITRATE SYNTHASE |
| CAI8032592.1 | |
| CAI8032596.1 | METHYLMALONYL-COA MUTASE, MITOCHONDRIAL-RELATED |
| CAI8032597.1 | METHYLMALONYL-COA MUTASE, MITOCHONDRIAL-RELATED |
| CAI8032595.1 | METHYLMALONYL-COA MUTASE, MITOCHONDRIAL-RELATED |
| CAI8032594.1 | METHYLMALONYL-COA MUTASE, MITOCHONDRIAL-RELATED |
| CAI8032593.1 | METHYLMALONYL-COA MUTASE, MITOCHONDRIAL-RELATED |
| CAI8032598.1 | METHYLMALONYL-COA MUTASE, MITOCHONDRIAL-RELATED |
| CAI8032599.1 | METHYLMALONYL-COA MUTASE, MITOCHONDRIAL-RELATED |
| CAI8032600.1 | METHYLMALONYL-COA MUTASE, MITOCHONDRIAL-RELATED |
| CAI8032601.1 | DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER |
| CAI8032602.1 | DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER |
| CAI8032603.1 | DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER |
| CAI8032604.1 | |
| CAI8032606.1 | SUCCINATE/FUMARATE MITOCHONDRIAL TRANSPORTER-RELATED |
| CAI8032605.1 | SUCCINATE/FUMARATE MITOCHONDRIAL TRANSPORTER-RELATED |
| CAI8032608.1 | TBP-1 INTERACTING PROTEIN |
| CAI8032607.1 | TBP-1 INTERACTING PROTEIN |
| CAI8032609.1 | TBP-1 INTERACTING PROTEIN |
| CAI8032610.1 | TBP-1 INTERACTING PROTEIN |
| CAI8032611.1 | |
| CAI8032613.1 | METHYLTRANSFERASE-RELATED |
| CAI8032612.1 | METHYLTRANSFERASE-RELATED |
| CAI8032614.1 | EH DOMAIN |
| CAI8032615.1 | TUBULIN |
| CAI8032616.1 | TUBULIN |
| CAI8032617.1 | |
| CAI8032618.1 | |
| CAI8032619.1 | |
| CAI8032621.1 |
