Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
Title | Journal | Pubmed ID |
---|---|---|
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
Gene ID | Description |
---|---|
CAI8032971.1 | |
CAI8032972.1 | HISTONE ACETYLTRANSFERASE |
CAI8032973.1 | HISTONE ACETYLTRANSFERASE |
CAI8032974.1 | HISTONE ACETYLTRANSFERASE |
CAI8032975.1 | HISTONE ACETYLTRANSFERASE |
CAI8032976.1 | HISTONE ACETYLTRANSFERASE |
CAI8032977.1 | PYRANOSE 2-OXIDASE |
CAI8032978.1 | ADENOMATOUS POLYPOSIS COLI PROTEIN FAMILY |
CAI8032979.1 | ADENOMATOUS POLYPOSIS COLI PROTEIN FAMILY |
CAI8032980.1 | ADENOMATOUS POLYPOSIS COLI PROTEIN FAMILY |
CAI8032981.1 | ADENOMATOUS POLYPOSIS COLI PROTEIN FAMILY |
CAI8032982.1 | COILED-COIL DOMAIN-CONTAINING PROTEIN 89 |
CAI8032983.1 | SIGNAL RECOGNITION PARTICLE 19 KD PROTEIN |
CAI8032984.1 | SIGNAL RECOGNITION PARTICLE 19 KD PROTEIN |
CAI8032986.1 | RNA 2',3'-CYCLIC PHOSPHODIESTERASE |
CAI8032985.1 | 40S RIBOSOMAL PROTEIN S27 |
CAI8032987.1 | CYTOCHROME C OXIDASE SUBUNIT VIIC |
CAI8032988.1 | THIOREDOXIN-LIKE PROTEIN 1 |
CAI8032989.1 | THIOREDOXIN-LIKE PROTEIN 1 |
CAI8032990.1 | |
CAI8032991.1 | |
CAI8032992.1 | |
CAI8032994.1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
CAI8032993.1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
CAI8032996.1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
CAI8032995.1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
CAI8033002.1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
CAI8033001.1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
CAI8033000.1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
CAI8032999.1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
CAI8032998.1 | |
CAI8032997.1 | |
CAI8033006.1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
CAI8033005.1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
CAI8033004.1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
CAI8033003.1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
CAI8033007.1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
CAI8033008.1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
CAI8033009.1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
CAI8033010.1 | |
CAI8033012.1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
CAI8033011.1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
CAI8033013.1 | YL-1 PROTEIN TRANSCRIPTION FACTOR-LIKE 1 |
CAI8033014.1 | UNCHARACTERIZED |
CAI8033015.1 | MEIOSIS-SPECIFIC NUCLEAR STRUCTURAL PROTEIN 1 |
CAI8033016.1 | MEIOSIS-SPECIFIC NUCLEAR STRUCTURAL PROTEIN 1 |
CAI8033017.1 | MEIOSIS-SPECIFIC NUCLEAR STRUCTURAL PROTEIN 1 |
CAI8033018.1 | MEIOSIS-SPECIFIC NUCLEAR STRUCTURAL PROTEIN 1 |
CAI8033019.1 | MEIOSIS-SPECIFIC NUCLEAR STRUCTURAL PROTEIN 1 |
CAI8033021.1 | U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B |