Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8033121.1 | ATP-BINDING TRANSPORT PROTEIN-RELATED |
| CAI8033122.1 | ATP-BINDING TRANSPORT PROTEIN-RELATED |
| CAI8033124.1 | MAINTENANCE OF TELOMOERE CAPPING |
| CAI8033123.1 | MAINTENANCE OF TELOMOERE CAPPING |
| CAI8033125.1 | MAINTENANCE OF TELOMOERE CAPPING |
| CAI8033126.1 | MAINTENANCE OF TELOMOERE CAPPING |
| CAI8033127.1 | MAINTENANCE OF TELOMOERE CAPPING |
| CAI8033128.1 | PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED |
| CAI8033129.1 | DNAJ HOMOLOG SUBFAMILY A MEMBER 3, MITOCHONDRIAL |
| CAI8033130.1 | |
| CAI8033131.1 | UBIQUITIN-FOLD MODIFIER 1 |
| CAI8033132.1 | |
| CAI8033134.1 | AMINO ACID TRANSPORTER |
| CAI8033133.1 | AMINO ACID TRANSPORTER |
| CAI8033135.1 | AMINO ACID TRANSPORTER |
| CAI8033136.1 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| CAI8033137.1 | |
| CAI8033140.1 | P PROTEIN |
| CAI8033139.1 | |
| CAI8033138.1 | |
| CAI8033141.1 | |
| CAI8033142.1 | P PROTEIN |
| CAI8033143.1 | P PROTEIN |
| CAI8033144.1 | P PROTEIN |
| CAI8033146.1 | STROMAL INTERACTION MOLECULE HOMOLOG |
| CAI8033145.1 | STROMAL INTERACTION MOLECULE HOMOLOG |
| CAI8033147.1 | TATA BOX-BINDING PROTEIN-ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT B |
| CAI8033148.1 | |
| CAI8033151.1 | OCTANOYLTRANSFERASE |
| CAI8033150.1 | OCTANOYLTRANSFERASE |
| CAI8033149.1 | OCTANOYLTRANSFERASE |
| CAI8033152.1 | WD REPEAT-CONTAINING PROTEIN 11 |
| CAI8033153.1 | FI17866P1 |
| CAI8033156.1 | FI17866P1 |
| CAI8033155.1 | FI17866P1 |
| CAI8033154.1 | FI17866P1 |
| CAI8033157.1 | UV-STIMULATED SCAFFOLD PROTEIN A |
| CAI8033158.1 | PROLINE OXIDASE |
| CAI8033159.1 | LIPID PHOSPHATE PHOSPHATASE |
| CAI8033162.1 | STEP II SPLICING FACTOR SLU7 |
| CAI8033161.1 | LIPID PHOSPHATE PHOSPHATASE |
| CAI8033160.1 | LIPID PHOSPHATE PHOSPHATASE |
| CAI8033163.1 | |
| CAI8033164.1 | |
| CAI8033166.1 | ACTIN |
| CAI8033165.1 | ACTIN |
| CAI8033167.1 | TETRATRICOPEPTIDE REPEAT PROTEIN 1 |
| CAI8033168.1 | |
| CAI8033169.1 | SOLUBLE LIVER ANTIGEN/LIVER PANCREAS ANTIGEN |
| CAI8033170.1 | SOLUBLE LIVER ANTIGEN/LIVER PANCREAS ANTIGEN |
