Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8033421.1 | |
| CAI8033424.1 | HELICASE WITH DEATH DOMAIN-RELATED |
| CAI8033423.1 | HELICASE WITH DEATH DOMAIN-RELATED |
| CAI8033422.1 | HELICASE WITH DEATH DOMAIN-RELATED |
| CAI8033425.1 | |
| CAI8033426.1 | METALLO-HYDROLASE YYCJ-RELATED |
| CAI8033427.1 | ADENYLOSUCCINATE LYASE |
| CAI8033428.1 | PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE SUBUNIT PURQ |
| CAI8033429.1 | PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE SUBUNIT PURL |
| CAI8033430.1 | AMIDOPHOSPHORIBOSYLTRANSFERASE |
| CAI8033431.1 | AMIDOPHOSPHORIBOSYLTRANSFERASE |
| CAI8033432.1 | TRIFUNCTIONAL PURINE BIOSYNTHETIC PROTEIN ADENOSINE-3-RELATED |
| CAI8033436.1 | SCAVENGER RECEPTOR DOMAIN-CONTAINING |
| CAI8033434.1 | |
| CAI8033433.1 | CYTOKINE RECEPTOR |
| CAI8033435.1 | SCAVENGER RECEPTOR DOMAIN-CONTAINING |
| CAI8033439.1 | PROTEASE FAMILY M24 METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P |
| CAI8033438.1 | PROTEASE FAMILY M24 METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P |
| CAI8033437.1 | PROTEASE FAMILY M24 METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P |
| CAI8033440.1 | PROTEASE FAMILY M24 METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P |
| CAI8033441.1 | |
| CAI8033442.1 | |
| CAI8033443.1 | |
| CAI8033447.1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| CAI8033446.1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| CAI8033445.1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| CAI8033444.1 | |
| CAI8033448.1 | IGGFC_BINDING DOMAIN-CONTAINING PROTEIN |
| CAI8033449.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8033450.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8033451.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8033452.1 | THROMBOSPONDIN |
| CAI8033453.1 | |
| CAI8033454.1 | |
| CAI8033455.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8033456.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8033457.1 | |
| CAI8033458.1 | |
| CAI8033459.1 | |
| CAI8033460.1 | |
| CAI8033461.1 | |
| CAI8033462.1 | |
| CAI8033464.1 | OS05G0300700 PROTEIN |
| CAI8033465.1 | OS05G0300700 PROTEIN |
| CAI8033463.1 | OS05G0300700 PROTEIN |
| CAI8033467.1 | OS05G0300700 PROTEIN |
| CAI8033466.1 | OS05G0300700 PROTEIN |
| CAI8033468.1 | OS05G0300700 PROTEIN |
| CAI8033469.1 | TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X |
| CAI8033470.1 |
