About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent～1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

<< First 66 67 68 69 70 71 72 73 74 75 Forward> Last>>        725 pages in total

Gene IDDescription
Clavulariidae_g13193H REPEAT-ASSOCIATED PREDICTED TRANSPOSASE
Clavulariidae_g13194HYDROLASE ALPHA/BETA FOLD FAMILY
Clavulariidae_g13195FAD-BINDING, PUTATIVE (AFU_ORTHOLOGUE AFUA_6G07600)-RELATED
Clavulariidae_g13196
Clavulariidae_g13197DNA GYRASE/TOPOISOMERASE SUBUNIT B
Clavulariidae_g13198UNCHARACTERIZED
Clavulariidae_g13199DIGUANYLATE CYCLASE DGCP
Clavulariidae_g132REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g1320ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g13200GLUTAMINE SYNTHETASE
Clavulariidae_g13201ASPARTATE AMINOTRANSFERASE
Clavulariidae_g13202SEL-1-LIKE PROTEIN
Clavulariidae_g132032-KETO-3-DEOXY-L-RHAMNONATE ALDOLASE
Clavulariidae_g13204SULFITE REDUCTASE
Clavulariidae_g13205
Clavulariidae_g13206ATP-DEPENDENT (S)-NAD(P)H-HYDRATE DEHYDRATASE FAMILY MEMBER
Clavulariidae_g13207PYRUVATE DEHYDROGENASE E1 COMPONENT
Clavulariidae_g13208TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE
Clavulariidae_g13209ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT
Clavulariidae_g1321
Clavulariidae_g13210ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED
Clavulariidae_g13211ATP DEPENDENT LON PROTEASE FAMILY MEMBER
Clavulariidae_g13212
Clavulariidae_g13213ASPARTYL/LYSYL-TRNA SYNTHETASE
Clavulariidae_g13214AGMATINE DEIMINASE-RELATED
Clavulariidae_g13215
Clavulariidae_g13216DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER
Clavulariidae_g13217ROK (REPRESSOR, ORF, KINASE) FAMILY
Clavulariidae_g13218REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM
Clavulariidae_g13219TRANSKETOLASE N-TERMINAL SECTION-RELATED
Clavulariidae_g1322
Clavulariidae_g13220PYRUVATE DEHYDROGENASE E1 COMPONENT
Clavulariidae_g13221GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE
Clavulariidae_g13222
Clavulariidae_g13223MYO-INOSITOL-1 PHOSPHATE SYNTHASE
Clavulariidae_g13224
Clavulariidae_g13225ACETYLTRANSFERASE
Clavulariidae_g13226TAIL-SPECIFIC PROTEASE
Clavulariidae_g13227RIBONUCLEASE
Clavulariidae_g13228DNA TOPOISOMERASE, TYPE IA, CORE
Clavulariidae_g13229
Clavulariidae_g1323EXPRESSED PROTEIN
Clavulariidae_g13230TRANSCRIPTIONAL REGULATORY PROTEIN
Clavulariidae_g13231
Clavulariidae_g13232
Clavulariidae_g13233
Clavulariidae_g13234FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS 2
Clavulariidae_g13235
Clavulariidae_g13236ALLANTOINASE
Clavulariidae_g13237ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL
TOP