About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_033151-T1
LLU|FUN_033152-T1
LLU|FUN_033153-T1
LLU|FUN_033154-T1
LLU|FUN_033155-T1
LLU|FUN_033156-T1
LLU|FUN_033157-T1
LLU|FUN_033158-T1DEAD-BOX ATP-DEPENDENT RNA HELICASE 50
LLU|FUN_033159-T1
LLU|FUN_033160-T1
LLU|FUN_033161-T1
LLU|FUN_033162-T1
LLU|FUN_033163-T1CARBOHYDRATE SULFOTRANSFERASE
LLU|FUN_033164-T1ARMADILLO REPEAT-CONTAINING PROTEIN 3
LLU|FUN_033165-T1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
LLU|FUN_033166-T1
LLU|FUN_033167-T1
LLU|FUN_033168-T1
LLU|FUN_033169-T1
LLU|FUN_033170-T1POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3
LLU|FUN_033171-T1
LLU|FUN_033172-T1-
LLU|FUN_033173-T1GABA-B RECEPTOR
LLU|FUN_033174-T1UNCHARACTERIZED
LLU|FUN_033175-T1WD40 REPEAT PROTEIN
LLU|FUN_033176-T1
LLU|FUN_033177-T1MAP/MICROTUBULE AFFINITY-REGULATING KINASE
LLU|FUN_033178-T1SEX PEPTIDE RECEPTOR
LLU|FUN_033179-T1
LLU|FUN_033180-T1COILED COIL DOMAIN-CONTAINING PROTEIN 8, CCDC8
LLU|FUN_033181-T1
LLU|FUN_033182-T1
LLU|FUN_033183-T1
LLU|FUN_033184-T1
LLU|FUN_033185-T1
LLU|FUN_033186-T1
LLU|FUN_033187-T1UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
LLU|FUN_033188-T1MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED
LLU|FUN_033189-T1ARP2/3 COMPLEX 20 KD SUBUNIT
LLU|FUN_033190-T1
LLU|FUN_033191-T1MEMBRANE-SPANNING 4-DOMAINS SUBFAMILY A MS4A -RELATED
LLU|FUN_033192-T1
LLU|FUN_033193-T1RAN GTPASE-ACTIVATING PROTEIN 1
LLU|FUN_033194-T1
LLU|FUN_033195-T1
LLU|FUN_033196-T1
LLU|FUN_033197-T1ALLANTOINASE
LLU|FUN_033198-T1E3 UBIQUITIN-PROTEIN LIGASE TTC3
LLU|FUN_033199-T1E3 UBIQUITIN-PROTEIN LIGASE TTC3
LLU|FUN_033200-T1
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