About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_033050-T1
LLU|FUN_033051-T1
LLU|FUN_033052-T1
LLU|FUN_033053-T1
LLU|FUN_033054-T1
LLU|FUN_033055-T1
LLU|FUN_033056-T1
LLU|FUN_033057-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_033058-T1
LLU|FUN_033060-T1
LLU|FUN_033061-T1PROTEIN SIDEKICK
LLU|FUN_033062-T1SIN3B-RELATED
LLU|FUN_033063-T1MESODERM DEVELOPMENT CANDIDATE 2
LLU|FUN_033064-T1UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
LLU|FUN_033065-T1EIF4G DOMAIN PROTEIN
LLU|FUN_033066-T1DYMECLIN
LLU|FUN_033067-T1
LLU|FUN_033068-T1SMAD
LLU|FUN_033069-T1
LLU|FUN_033070-T1
LLU|FUN_033071-T1
LLU|FUN_033072-T1SMAD
LLU|FUN_033073-T1
LLU|FUN_033074-T1RFX TRANSCRIPTION FACTOR FAMILY
LLU|FUN_033075-T1TSEC1-RELATED
LLU|FUN_033076-T1
LLU|FUN_033077-T1SYNAPTIC VESICLE GLYCOPROTEIN 2
LLU|FUN_033078-T1
LLU|FUN_033079-T1
LLU|FUN_033080-T1
LLU|FUN_033081-T1SNF2/RAD54 FAMILY MEMBER
LLU|FUN_033082-T1SNF2/RAD54 FAMILY MEMBER
LLU|FUN_033083-T1
LLU|FUN_033084-T1HISTONE H3 METHYLTRANSFERASE
LLU|FUN_033085-T1HISTONE H3 METHYLTRANSFERASE
LLU|FUN_033086-T1
LLU|FUN_033087-T1
LLU|FUN_033088-T1
LLU|FUN_033089-T1
LLU|FUN_033090-T1
LLU|FUN_033091-T1
LLU|FUN_033092-T1
LLU|FUN_033093-T1
LLU|FUN_033094-T1
LLU|FUN_033095-T1HYR DOMAIN-CONTAINING PROTEIN
LLU|FUN_033096-T1
LLU|FUN_033097-T1HYR DOMAIN-CONTAINING PROTEIN
LLU|FUN_033098-T1HYR DOMAIN-CONTAINING PROTEIN
LLU|FUN_033099-T1
LLU|FUN_033100-T1
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