About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_033201-T1
LLU|FUN_033202-T1
LLU|FUN_033203-T1
LLU|FUN_033204-T1ELKS/RAB6-INTERACTING/CAST PROTEIN
LLU|FUN_033205-T1ELKS/RAB6-INTERACTING/CAST PROTEIN
LLU|FUN_033206-T1DNA REPAIR AND RECOMBINATION PROTEIN RAD52, RAD59
LLU|FUN_033207-T1UNCHARACTERIZED
LLU|FUN_033208-T1
LLU|FUN_033211-T1LIM DOMAIN-CONTAINING PROTEIN
LLU|FUN_033212-T1
LLU|FUN_033213-T1
LLU|FUN_033214-T1
LLU|FUN_033215-T1
LLU|FUN_033216-T1
LLU|FUN_033217-T1PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASE
LLU|FUN_033218-T1
LLU|FUN_033219-T1EGF-LIKE DOMAIN-CONTAINING PROTEIN
LLU|FUN_033220-T1UNCHARACTERIZED
LLU|FUN_033240-T1
LLU|FUN_033241-T1SET AND MYND DOMAIN-CONTAINING PROTEIN 4
LLU|FUN_033242-T1DUAL SPECIFICITY PROTEIN PHOSPHATASE
LLU|FUN_033243-T1UBIQUITIN-ASSOCIATED AND SH3 DOMAIN-CONTAINING BA-RELATED
LLU|FUN_033245-T1
LLU|FUN_033246-T1ZGC:194242
LLU|FUN_033247-T1
LLU|FUN_033248-T1
LLU|FUN_033249-T1G PROTEIN-COUPLED RECEPTOR KINASE/RIBOSOMAL PROTEIN S6 KINASE
LLU|FUN_033250-T1
LLU|FUN_033251-T1
LLU|FUN_033252-T1COLIPASE
LLU|FUN_033253-T1
LLU|FUN_033254-T1COLIPASE
LLU|FUN_033255-T1LEUCINE-ZIPPER-LIKE TRANSCRIPTIONAL REGULATOR 1
LLU|FUN_033256-T1RIBOSOME MATURATION PROTEIN SBDS
LLU|FUN_033257-T160S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER
LLU|FUN_033258-T1RNA POLYMERASE II HOLOENZYME COMPONENT SRB7
LLU|FUN_033259-T1GLYCOSYLTRANSFERASE 14 FAMILY MEMBER
LLU|FUN_033260-T1
LLU|FUN_033261-T1
LLU|FUN_033262-T1
LLU|FUN_033265-T1
LLU|FUN_033266-T1SRCR DOMAIN-CONTAINING PROTEIN
LLU|FUN_033267-T1UNCHARACTERIZED
LLU|FUN_033268-T1UNCHARACTERIZED
LLU|FUN_033269-T1
LLU|FUN_033270-T1
LLU|FUN_033271-T1LIPOYL SYNTHASE
LLU|FUN_033272-T1SH3 DOMAIN-CONTAINING
LLU|FUN_033273-T1
LLU|FUN_033274-T1RAI16 PROTEIN-RELATED
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