About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_032899-T1
LLU|FUN_032900-T1
LLU|FUN_032901-T1
LLU|FUN_032902-T1
LLU|FUN_032903-T1
LLU|FUN_032905-T1
LLU|FUN_032906-T1SERINE/THREONINE/TYROSINE-INTERACTING PROTEIN
LLU|FUN_032907-T1CELL DEATH REGULATOR AVEN
LLU|FUN_032908-T1BETA-GLUCURONIDASE
LLU|FUN_032909-T1STAR-RELATED LIPID TRANSFER PROTEIN 9
LLU|FUN_032910-T1LEUCINE RICH REPEAT FAMILY PROTEIN
LLU|FUN_032911-T1LEUCINE RICH REPEAT FAMILY PROTEIN
LLU|FUN_032912-T1
LLU|FUN_032913-T1
LLU|FUN_032914-T1
LLU|FUN_032915-T1HISTONE H4
LLU|FUN_032916-T1HISTONE H2A
LLU|FUN_032917-T1HISTONE H2B
LLU|FUN_032918-T1HISTONE H3
LLU|FUN_032919-T1KREV INTERACTION TRAPPED 1-RELATED
LLU|FUN_032920-T1TNF RECEPTOR ASSOCIATED FACTOR
LLU|FUN_032921-T1TNF RECEPTOR ASSOCIATED FACTOR
LLU|FUN_032922-T1
LLU|FUN_032923-T1TNF RECEPTOR ASSOCIATED FACTOR
LLU|FUN_032924-T1
LLU|FUN_032925-T1
LLU|FUN_032926-T1
LLU|FUN_032927-T1
LLU|FUN_032928-T1
LLU|FUN_032929-T1MONOCARBOXYLATE TRANSPORTER
LLU|FUN_032930-T1
LLU|FUN_032931-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
LLU|FUN_032932-T1
LLU|FUN_032933-T1EXPRESSED PROTEIN
LLU|FUN_032934-T1
LLU|FUN_032935-T1
LLU|FUN_032936-T1AAA DOMAIN-CONTAINING
LLU|FUN_032937-T1RNA POLYMERASE III DNA DIRECTED , 39KD SUBUNIT-RELATED
LLU|FUN_032938-T1HISTONE ACETYLTRANSFERASE
LLU|FUN_032939-T1RIBONUCLEASE Y
LLU|FUN_032940-T1KICSTOR COMPLEX PROTEIN KAPTIN
LLU|FUN_032941-T1BOULE-RELATED
LLU|FUN_032942-T1ALKYLATED DNA REPAIR PROTEIN ALKB-RELATED
LLU|FUN_032943-T1
LLU|FUN_032944-T1
LLU|FUN_032945-T1SEC10
LLU|FUN_032946-T1KRAB AND ZINC FINGER DOMAIN-CONTAINING
LLU|FUN_032947-T1POTASSIUM CHANNEL, SUBFAMILY K
LLU|FUN_032948-T1
LLU|FUN_032949-T1PROTEIN CBG04600
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