About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_032647-T1
LLU|FUN_032648-T1
LLU|FUN_032649-T1
LLU|FUN_032650-T1
LLU|FUN_032651-T1
LLU|FUN_032652-T1
LLU|FUN_032653-T1
LLU|FUN_032654-T1NEURON-DERIVED NEUROTROPHIC FACTOR
LLU|FUN_032655-T1NEURON-DERIVED NEUROTROPHIC FACTOR
LLU|FUN_032656-T1UNCHARACTERIZED
LLU|FUN_032657-T1MARGINAL ZONE B- AND B1-CELL-SPECIFIC PROTEIN
LLU|FUN_032658-T1PUTATIVE-RELATED
LLU|FUN_032659-T1SH3 DOMAIN-CONTAINING
LLU|FUN_032660-T1
LLU|FUN_032661-T1TNF RECEPTOR ASSOCIATED FACTOR
LLU|FUN_032662-T1
LLU|FUN_032663-T1
LLU|FUN_032664-T1
LLU|FUN_032665-T1
LLU|FUN_032666-T1
LLU|FUN_032667-T1
LLU|FUN_032668-T1
LLU|FUN_032669-T1PROTEIN ZERKNUELLT 1-RELATED
LLU|FUN_032670-T1PROTEIN ZERKNUELLT 1-RELATED
LLU|FUN_032671-T1
LLU|FUN_032672-T1
LLU|FUN_032673-T1HOMEOBOX PROTEIN ROUGH-RELATED
LLU|FUN_032674-T1WD REPEAT-CONTAINING PROTEIN 55
LLU|FUN_032675-T1DENDRITIC CELL-SPECIFIC TRANSMEMBRANE PROTEIN
LLU|FUN_032676-T1DENDRITIC CELL-SPECIFIC TRANSMEMBRANE PROTEIN
LLU|FUN_032677-T1IONOTROPIC RECEPTOR 20A-RELATED
LLU|FUN_032678-T1
LLU|FUN_032679-T1IONOTROPIC RECEPTOR 20A-RELATED
LLU|FUN_032680-T1
LLU|FUN_032681-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_032682-T1
LLU|FUN_032683-T1
LLU|FUN_032684-T1
LLU|FUN_032685-T1IONOTROPIC RECEPTOR 20A-RELATED
LLU|FUN_032686-T1
LLU|FUN_032687-T1XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER
LLU|FUN_032688-T1XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER
LLU|FUN_032689-T1
LLU|FUN_032690-T1
LLU|FUN_032691-T1
LLU|FUN_032692-T1NEPHRIN
LLU|FUN_032693-T1BASIGIN RELATED
LLU|FUN_032694-T1IG-LIKE DOMAIN-CONTAINING PROTEIN
LLU|FUN_032695-T1
LLU|FUN_032696-T1IG-LIKE DOMAIN-CONTAINING PROTEIN
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